| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2981 |
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| Symbol | |
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| ID | 8254093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3559700 |
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| End bp | 3566590 |
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| Gene Length | 6891 bp |
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| Protein Length | 2296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644936630 |
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| Product | NHL repeat containing protein |
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| Protein accession | YP_003093241 |
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| Protein GI | 255532869 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAA CAGCTACTCA ACTATTTTTT GCTTCATCAA AGCGATCTGC CACTTTCATT
TTATTGTTCT TGTTCCATTT CTTCGCAGCA TTAAGCAGCC AGGCCCAGAC TGTAAGCCCC
TATGCCGGCA CAGGTGTAGA TGGTTATTAT GAAGGGGACA ACAATGACGC GATTACTGCA
CAATTTTCTT ATATCGGAGG TATAACTACA GATGCAAACA ACAACCTGTA TGTTACGGAT
TCCCGGAACT ATTGTATCCG GAAGATCGAT CAGAACGGCA AGGTCAGCGT AATTGCCGGA
ATACCTACAA CTGCGGGCAG TACCAATCCG CTGCCATCGG GCCCTGCAGG CAGCACAGCA
CTGCCATCGT TGGGCACACG TATTACCTTG CTGAACAACA ATATGTATTT CGGTTATAAT
GGATTTACCC TTGGTGAAAT TTCTGCCGGC AACGTATCCT TCTGGAAGCC CATACATACC
AATCCCGGAT CTTCCCTGCC TACCGCATAT ACCTTTAAAG CCTATGGCAA TGCGCTTTAT
CTGGGACATA GCGGTGGAAT CAGTGTGGTT GATGTGAGCA CCAGGACGCT GGTTAAAACG
ATAACCCTTC CCGGAACAGG GCAGATCAAT ACCATGGCGA TCGACGCTAG CGGAAATATC
TTTGCCATTG ATGCCGATGG TGCACTTACC AAAGTAAATG GCGTTACCGG TGCGGTAACT
ACCCTGATTG CTAAAAATTC TGATCCGGAC CTGTATGTAA ATACCGGAGA CCTGGATGTA
GACCAAAGTG GTAACCTGTA TTTTGTAAAC AGTTTAGATT ATGTACTCAA AATAGACGGG
ACCACCTTTC AGCGGACTAA AATATATGTA ACAACGGGCA CTTTTGGTTT GAAATTGCTG
AGCATTGCCC CCAACGGTGA TATTTTTGTA GGGCATACCA ACCGCAGGAT CTATAAAATA
GCTGTACCAT CTGCCAATGC TAACCTTAGT GCACTGGCCA TCAGTTCAGG AACACTGCAG
CCTGTTTTTG ATAAAAATAC ACTCGGTTAT ACCGCATCGG TTGATCCTGC AGTAAGCAGC
ATCACCCTTA CCCCAACTGT TGACCATGCT TCGGCAAGCC TGCACATCAG GCTCAACGGA
GGTAGCTATA CCTCCCTGAG CAGCGGAACA GCATCTGCCG CACTGCCTTT AACAACGGGC
GATAATACCA TCGAAATAAG GGTAACCGCT CAGAACAACA GTACAAAGAC CTATACGTTG
ATCGTAAACA GGCCCGCGCC ACCACTTCCA TTGAGCCCCC AGTTTACCAG TACTCCGGTA
ACCACTGCAG CGGTAAACCA GCGCTATACC TACCAGATCC AGGCCATCTC TGGGGCCAAA
GAACCCATCA GCCTAACTGC AGCAGGTTTG CCAGACTGGC TGGTTTTAAC ACCAGGACTG
GTGGTGAAAC GTTTTGTGGG AAAAGATCTG GGCTATGCCA ACGGCACAGG TACCAGCGCT
ATGTTCAACT CACCTGCTGG CATCGCTATG GATGCAGCAG GCAATACTTA TCTGGCTGAT
AGGGGTAACC ACCGTATCCG TAAAATCAGC CCTGCAGGTG TGGTAACCAC ATTGGCCGGT
AGCGGGACCG CTGGTTTCGC CGATGGGGCA GGTGCAGCTG CACAATTCAA TGATCCTTCC
GGCGTAGCTG TAGATGCAGC CGGTAATGTA TATGTATCAG ATACCCGTAA TTTTCGTGTC
CGCAAAATTA CCCCTGCAGG CCAGGTAAGC ACTTTTGCAG GTACAGGAAC ATATGGCTAT
GCAAATGGTA CTACCACTAC CGCTACTTTT ACCTACCTTT TAGGTATCGC TATCGATAAC
TCGGGGAACC TGTACGTTAC CGACCAGGAC GTGAACAGCA TTCGTAAAAT TACACCTGGC
GGAGTGGTAT CTACTTTTGC AGGCAGCGGA GTAAAAGGTT TTAAAGATGG CACAGGTACT
GCAGCCCAGT TTGCATTTCC TACAGGCCTT GCTGCCGATG CCGCGGGCAA TGTGTATGTA
GCAGACCGCG ACAATCACCG CATCCGTAAA ATTACTGCAG CCGGGGTAGT AACTACACTA
GCAGGAAACG GCACCGCCGA TTTTGCCGAT GGGACACAGG CCAACGCCAG GTTTAACATG
CCTGTAGGGG TAGCTGTTGA TGCCAACGGC AATGTGTTTG TGGCAGACAG AAATAATTTC
CGCATCCGCA AAGTTACACC TGCAGGTGTA GTTAGCACCT ATGCCGGTAA GGGGACATCC
GGTTTTGCCG AAGGCCTGTC TGGCGATGCA CAGTTCAAAT TGGTTTTCGG ACTGGCAATG
AGCAGCATTT CCGGTAATCT GTATATTAGC GACCAGGGCA ACTTCAATGT CAGTTTCATT
ACAGACGGGG GTATTTTAAG CGGAACCCCA ACTGTAGCTG GTGTAAACGC TATAAAACTC
AAGGCTACAA ACACCAATGG CAATCAGGAT CAGGACTTTG ACATTACGGT AACCGGTCCG
GCAACATTGA GTAATTTCCC TGATCTTGAT AAAGCAGAGG GTAATGCACC TTTTGCACTT
ACCGCTCCGC AAAGCAACAA TGCCCTCGGT ACATTTACTT ATACCAGCAG CAATCCTGCT
GTAGCTTCCA TTATTGGAAA CATGGTAACC ATCCATAAAC CAGGGCAGGT GGTTATTACT
GCTACCCAGC AGGCGTACGA CTACTTTACC CAGAGCCAAA TAACAGCTAC ACTGCGCATA
ACAGGCAAAC CTGCTTTTAC CAGCCAGCCC CTAACTACCG CAACTGTTGG CCAGGCCTAT
AGTTATTCCA TCAAAGCCAG CAAAGAAGGC AGTCTGGAAA CCAGCATTGC TGCCCCAACT
TTGCCGGACT GGCTGACATT AGATGGCCAG AAATATAATC CGGTTGTGCT GGCCACCTCT
ACGCTCGAAA TGTCCGGTCT TACAAAGGAT AGCGAGGGCA ACATCTACAG TACCGAATAC
AACGGACAGG CCATTTATAA GATCAATAAA TCCAATGGGG CCATCCTGCC CTGGGCAAAC
CGCGTTACCG GAAGGGTTTA TGGAATAGCT GTGCACGATG GCTATCTTTA CATCAGCCGG
GTAGATGACC GTAAGATCAC CCGCATCCAG CTGGCAAACC CTGCAGCAGG CGAGTCGGAT
GTCATCACCA ATATTAACGG ACCCATGAGC TTTACTGTAC ACAACAATGA GCTCTATGCC
GCTATGCAAA CCAAGATCAT TAAAATCAAC ACTACCGCAA AAACCTACCA GACTTTTCTG
GATGTGCCGG GTGCAAATCT TAGTGGCCTT GTATTCGACC AGCAAGGGAA CCTTTTGTTC
GGTCAGTCTT ACCCCATCAC AAGGATCGCT AAATTTGACG GACAAACAGT GAGTACACTG
ATTCCGGATG TTTTTGCCTA CAACCTGGAT ATGGACAAAA GCGGTGCATT GTATGTGGCG
GGTTACGGTC TCACAAAATA TACAGCAGAC CTTTCTTCCA GCACCAAACT GACTGAAGCC
AGAAATGTAC TCGGATTGCT GCTCGATGAT TCAGAAAACC TGTATTACAA CAATTTTTCA
GAAAACACCA TTAACATGCT CGAACTGGCT GCTATACTGA CTGGTACCCC ACAGGTTAAA
GACATCGGTG TGCATCCTGT AGTGCTCAAA GCCAGCAATA CTGCAGGTAG CACAAACCAG
ACTTTTAATA TTACCGTAAG CGGCCCGGCC ACATTGAGTA ATTTTGCCAA CCTGAGCAAA
CAATATGGCG ACTCAGATTT CACCATTACG GCTCCGCAAA GTAACAATGC GGATGGCGCG
TTTACTTACA GCAGCAGCGA CCCTGCTGTA GCTGCTGTTA ACGGCAGTTC CATTAAATTA
CTTAAGCCCG GAAGCACCAC CATCACCGCT ACACAGGCCG CAAACGGATA TTATACTTCT
GCAACGATTA CGGCAACCTT AACCGTTCTT CCCAAAGCAC TGAGCCTGAG CCTGTCTGCC
GCACCACTGA TCACCAAAAG CTATGATGGC ACAACTGCTG TGTCATTGAG CGAAGGCAAT
TACCAGCTAA CAGGCCTGGT GGGGTCTGAT GTACTGACAG TAAGCGGAAC GGCAAGTTTT
GACAGTAAAA ATGCCGGCGA AAATAAAACA GTGCTGGTCA AAGGTTTTGT GCTTTCGGGT
GCGAAGAAAG ACTACTACAG TCTGACTACA GGGGCCTTAA GCACAACAGG AAGTATAACA
GCACGGACAA TAACTGCAAG GGTAAACCCG GTGCGTAAAA CTTATGATGG AAATGAAGCA
GCCACTGTTA ATTTTATTGA TTTTTCTGTA GCCGATGGCC TTATTGCCAA CGACCAGCTG
GCTGTAACTT ACGGATCGGC CAGTTACGAC AATCCAAATG CCGGAAGCAC AAAGCCGGTT
GCCTTTGCAG ACTTAAATTT AACAGGGGCC GACAAAGCCA ATTATAAACT TGCAGATGTA
GCTGTAACTG GTGCAATTGA AGCCAGGGCC GTAACTGTAA CAGCAAGTAC CGGCGCTAAA
GTTTACGGTG AGCCGGACCC TGAATTTGGG TATACACTCT CTGAACCCCT TATACCTGGT
GATGCCTTTA AGGGCAAACT GGACAGAACT GCCGGTGAAA CTGTAAATAC TTACCCGGTT
AGCCGGGGTA CGCTGGAACT GGGCAGCAAT TATACGCTGA ATTTTGTAGG TGCTGATTTT
ACCATTAGCC CAAGACCTTT GACCATCACA GCTGCCCAGC TAAACAAAAC TTATGGAACT
GCGCTAACCT TTAGCGGAAC AGAGTTTACG GCTACAGGCC TGGTTTACGG TAATACAGTA
GGCAGCGTAA ATTTATCCAG TCCGGGTGCC CTGGCAACAG CTACAGTAGC CGGTGGTCCC
TATCCGCTTG TCCCTTCGGC TGCAAGTGGT ACCGCACTAA GCAATTATAC CATCAGTTAT
GTAAACGGTA CTTTAACCAT TGATCCAAAG GCCCTGGTAG TTGTAAATGA CAGCAGGACC
AAAGCCTATG GAGAAAGCCT GGGTAATGCC GACTTTACAG GAAGCCTTAC AGGTTTGCAG
AATGGTGACC TCATCAGCCT TAGCAGGAGC AGTACAGGTG CAGTGTCCAG CGCTGCTGCT
GGGGTAAACT ATCCGATTGT GGCCACACTT GCAGATCCGC AGGGTAAACT GGGCAATTAT
ACATTAAGCA ATACTGATGG TACACTTACC GTGGCGCAAA GGAGCCTGAC TATAACCGCC
CTGCCGGCGG TAAAGACCTA CGGCGAAACC CTTAACTTTG CAGGCACAGC GTTTAGTACA
ACAGGTTTAA TCAATAACGA TGTGGTAAAC AGCGTAACTT TGACCAGTAA TGGCGCAGCA
GCAGCTGCAA CAGTAGCCGA CCAGCCTTAT GCTATTGTTC CATCGGCAGC CATAGGCACA
GGATTAAACA ATTATGCCAT CAGCTACGTT AACGGCGCTT TGAGCGTAAA TAAAAAAGCC
CTGATCATTA CAGCCGATAA CAAAGAGAAG TTTGCAGGTA CGGCCAATCC TGTCCTGACT
GCAAGTTACA ACGGCTTTGT GAACAACGAC AGCAATGCTG CACTGACTGC CCAGCCGCAA
ATAACTACCA CTGCAAATAC CAACAGTCCT ATTGGTGATT ATGTTATCAA TATTGGCGGC
GCAGCAGCTG CAAATTATAG CATCAGTTAT ATACCGGGTA ACCTGAAAAT TAAACCAGGT
GCGCCAACCA GCATCAGTCT TGCTGGGGTA ATGCTTTATG AAAACAGTCC GGCAGGCACA
AATGCCGGTA CACTGAGCAG TACTTCCGAT GATCCTTCGG CCATCTTTAC TTATACATTG
GCTGCAGGAG CAGGGGATAC CGACAATTCC CTGTTTGCCA TTAACGGAAA TAAAATCAAC
ACCAGCGCTG CCCTGGATTA TGAAAATAAG GCCGTCTATA AAATAAGGGT AAGGTCGACC
ACTCAAAACA GCCTTTGGCT GGAAAAAGAA CTGAGCATCA ATTTAACCGA TGTGAACGAA
GCGCCTGCAC TGGCTGCTAT TGCCGATCAG ACCATTTGCT TTACAACAGC AGTACAAACA
GTTGCTTTAA CTGGCATCAG TGCAGGCCCC GAAACCACAC AAACCACCAC TTTAACTGTG
AGCAGTAACA ATGCGGGTTT ATTTGATGCT TTAAACGTTA GTGGCAGCGG TGCTACCGGT
ACATTAACTT ACCGCATTAA AGCTGGCGCC CTGGCCGGAA CAGCCAGGGT AACCGTAACT
GTAAAAGACA ATGGGGGTAC GGCAAACGGG GGTATTGATA CCTATAGCAG AACTTTTACC
CTTACTGTAA ACGCCCTGCC GGTAGTTTCC ATCAGCAGTG ATAAAGGAAC GGAGATCAGT
AAAGGAGAGG CTGTATTGTT AACCGCTACA GGTGGCAGCA GCTATGTATG GGCAAATGCA
AATGGTATTA TAAGAGGACA AAATACTGCA GTATTGGAGC TGAGACCAAG CCAGACCACA
ACTTATACGG TAACAGTAAC CAATGCCAGC GGTTGTACAG CAACCAAAAG CTTTACGCTA
ACCGTACTGG AAGACTTTGC CACAATAAAG GCTACCAATA TCATGTCCCC GAACGGAGAT
GGGCTGAATG ATAAATGGGT AATCGATAAC ATCGACCTAT ATCCAAACAA TGAGGTCAGG
ATCTTTGACA AGGCCGGTCG TTTCATTTAC GGTAAAAAAG GGTACGACAA CAGCTGGGAT
GCTACATTAA ACGGTTCACC TTTGGCAGAA GGTACTTATT ATTATGTCAT CGATTTCGGA
ACCAGCAGAC CTAAGTTCAA AGGCTTCATT ACAGTTATCA GACAAGATTA A
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| Protein sequence | MDITATQLFF ASSKRSATFI LLFLFHFFAA LSSQAQTVSP YAGTGVDGYY EGDNNDAITA
QFSYIGGITT DANNNLYVTD SRNYCIRKID QNGKVSVIAG IPTTAGSTNP LPSGPAGSTA
LPSLGTRITL LNNNMYFGYN GFTLGEISAG NVSFWKPIHT NPGSSLPTAY TFKAYGNALY
LGHSGGISVV DVSTRTLVKT ITLPGTGQIN TMAIDASGNI FAIDADGALT KVNGVTGAVT
TLIAKNSDPD LYVNTGDLDV DQSGNLYFVN SLDYVLKIDG TTFQRTKIYV TTGTFGLKLL
SIAPNGDIFV GHTNRRIYKI AVPSANANLS ALAISSGTLQ PVFDKNTLGY TASVDPAVSS
ITLTPTVDHA SASLHIRLNG GSYTSLSSGT ASAALPLTTG DNTIEIRVTA QNNSTKTYTL
IVNRPAPPLP LSPQFTSTPV TTAAVNQRYT YQIQAISGAK EPISLTAAGL PDWLVLTPGL
VVKRFVGKDL GYANGTGTSA MFNSPAGIAM DAAGNTYLAD RGNHRIRKIS PAGVVTTLAG
SGTAGFADGA GAAAQFNDPS GVAVDAAGNV YVSDTRNFRV RKITPAGQVS TFAGTGTYGY
ANGTTTTATF TYLLGIAIDN SGNLYVTDQD VNSIRKITPG GVVSTFAGSG VKGFKDGTGT
AAQFAFPTGL AADAAGNVYV ADRDNHRIRK ITAAGVVTTL AGNGTADFAD GTQANARFNM
PVGVAVDANG NVFVADRNNF RIRKVTPAGV VSTYAGKGTS GFAEGLSGDA QFKLVFGLAM
SSISGNLYIS DQGNFNVSFI TDGGILSGTP TVAGVNAIKL KATNTNGNQD QDFDITVTGP
ATLSNFPDLD KAEGNAPFAL TAPQSNNALG TFTYTSSNPA VASIIGNMVT IHKPGQVVIT
ATQQAYDYFT QSQITATLRI TGKPAFTSQP LTTATVGQAY SYSIKASKEG SLETSIAAPT
LPDWLTLDGQ KYNPVVLATS TLEMSGLTKD SEGNIYSTEY NGQAIYKINK SNGAILPWAN
RVTGRVYGIA VHDGYLYISR VDDRKITRIQ LANPAAGESD VITNINGPMS FTVHNNELYA
AMQTKIIKIN TTAKTYQTFL DVPGANLSGL VFDQQGNLLF GQSYPITRIA KFDGQTVSTL
IPDVFAYNLD MDKSGALYVA GYGLTKYTAD LSSSTKLTEA RNVLGLLLDD SENLYYNNFS
ENTINMLELA AILTGTPQVK DIGVHPVVLK ASNTAGSTNQ TFNITVSGPA TLSNFANLSK
QYGDSDFTIT APQSNNADGA FTYSSSDPAV AAVNGSSIKL LKPGSTTITA TQAANGYYTS
ATITATLTVL PKALSLSLSA APLITKSYDG TTAVSLSEGN YQLTGLVGSD VLTVSGTASF
DSKNAGENKT VLVKGFVLSG AKKDYYSLTT GALSTTGSIT ARTITARVNP VRKTYDGNEA
ATVNFIDFSV ADGLIANDQL AVTYGSASYD NPNAGSTKPV AFADLNLTGA DKANYKLADV
AVTGAIEARA VTVTASTGAK VYGEPDPEFG YTLSEPLIPG DAFKGKLDRT AGETVNTYPV
SRGTLELGSN YTLNFVGADF TISPRPLTIT AAQLNKTYGT ALTFSGTEFT ATGLVYGNTV
GSVNLSSPGA LATATVAGGP YPLVPSAASG TALSNYTISY VNGTLTIDPK ALVVVNDSRT
KAYGESLGNA DFTGSLTGLQ NGDLISLSRS STGAVSSAAA GVNYPIVATL ADPQGKLGNY
TLSNTDGTLT VAQRSLTITA LPAVKTYGET LNFAGTAFST TGLINNDVVN SVTLTSNGAA
AAATVADQPY AIVPSAAIGT GLNNYAISYV NGALSVNKKA LIITADNKEK FAGTANPVLT
ASYNGFVNND SNAALTAQPQ ITTTANTNSP IGDYVINIGG AAAANYSISY IPGNLKIKPG
APTSISLAGV MLYENSPAGT NAGTLSSTSD DPSAIFTYTL AAGAGDTDNS LFAINGNKIN
TSAALDYENK AVYKIRVRST TQNSLWLEKE LSINLTDVNE APALAAIADQ TICFTTAVQT
VALTGISAGP ETTQTTTLTV SSNNAGLFDA LNVSGSGATG TLTYRIKAGA LAGTARVTVT
VKDNGGTANG GIDTYSRTFT LTVNALPVVS ISSDKGTEIS KGEAVLLTAT GGSSYVWANA
NGIIRGQNTA VLELRPSQTT TYTVTVTNAS GCTATKSFTL TVLEDFATIK ATNIMSPNGD
GLNDKWVIDN IDLYPNNEVR IFDKAGRFIY GKKGYDNSWD ATLNGSPLAE GTYYYVIDFG
TSRPKFKGFI TVIRQD
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