Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2948 |
Symbol | |
ID | 8254059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3513268 |
End bp | 3513849 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936596 |
Product | protein of unknown function DUF162 |
Protein accession | YP_003093208 |
Protein GI | 255532836 |
COG category | [S] Function unknown |
COG ID | [COG1556] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGCA GAGCACAGAT ATTAGCCAGC GTATTACAAA ACCAGCCTGA ACTGCAGGCC TTACCGGAAG ATTTACAGAC CAGCTTTCCT GCAGCAGATC CTGTGGAAGC TTTTAAAAAT GTACTGACAA CCATTGGAGG TGCATTTATT GAAGTTTCAG ATTATCTGGC TATACAAAAC TATATATCAG AACATTTTGC CGGACAGCGT GTGGTTTCTA CTTTACCGGA ACTGGCAGCA ATAAGCGAAA AGGGCTGGGA AAACCAGGAC CCGCACAGCT ACGCAAATGT AGACCTGGCC ATCATTACCG CCCATTTCGG GGTAGCAGAA AATGCGGCCT TATGGATTAC AGAAGACCTG ATGCAGCAAA GGGCTGTACC TTTTATTTGT CAGCAACTGG CTGTTGTGAT CAGCAAAAAG TACATTGTAC AAACCATGCA TGATGCCTAT TTAAAAATAG GTACCGCGGA TTATGGTTTC GGGAGTTTCA TAGCCGGCCC TTCTAAAACG GCAGATATAG AGCAATCGCT GGTGCTTGGC GCACATGGGC CAAAAAGCAT GACGGTGTTT GCGCTGGATT AA
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Protein sequence | MSSRAQILAS VLQNQPELQA LPEDLQTSFP AADPVEAFKN VLTTIGGAFI EVSDYLAIQN YISEHFAGQR VVSTLPELAA ISEKGWENQD PHSYANVDLA IITAHFGVAE NAALWITEDL MQQRAVPFIC QQLAVVISKK YIVQTMHDAY LKIGTADYGF GSFIAGPSKT ADIEQSLVLG AHGPKSMTVF ALD
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