Gene Phep_2948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2948 
Symbol 
ID8254059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3513268 
End bp3513849 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content46% 
IMG OID644936596 
Productprotein of unknown function DUF162 
Protein accessionYP_003093208 
Protein GI255532836 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAGCA GAGCACAGAT ATTAGCCAGC GTATTACAAA ACCAGCCTGA ACTGCAGGCC 
TTACCGGAAG ATTTACAGAC CAGCTTTCCT GCAGCAGATC CTGTGGAAGC TTTTAAAAAT
GTACTGACAA CCATTGGAGG TGCATTTATT GAAGTTTCAG ATTATCTGGC TATACAAAAC
TATATATCAG AACATTTTGC CGGACAGCGT GTGGTTTCTA CTTTACCGGA ACTGGCAGCA
ATAAGCGAAA AGGGCTGGGA AAACCAGGAC CCGCACAGCT ACGCAAATGT AGACCTGGCC
ATCATTACCG CCCATTTCGG GGTAGCAGAA AATGCGGCCT TATGGATTAC AGAAGACCTG
ATGCAGCAAA GGGCTGTACC TTTTATTTGT CAGCAACTGG CTGTTGTGAT CAGCAAAAAG
TACATTGTAC AAACCATGCA TGATGCCTAT TTAAAAATAG GTACCGCGGA TTATGGTTTC
GGGAGTTTCA TAGCCGGCCC TTCTAAAACG GCAGATATAG AGCAATCGCT GGTGCTTGGC
GCACATGGGC CAAAAAGCAT GACGGTGTTT GCGCTGGATT AA
 
Protein sequence
MSSRAQILAS VLQNQPELQA LPEDLQTSFP AADPVEAFKN VLTTIGGAFI EVSDYLAIQN 
YISEHFAGQR VVSTLPELAA ISEKGWENQD PHSYANVDLA IITAHFGVAE NAALWITEDL
MQQRAVPFIC QQLAVVISKK YIVQTMHDAY LKIGTADYGF GSFIAGPSKT ADIEQSLVLG
AHGPKSMTVF ALD