| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2931 |
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| Symbol | |
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| ID | 8254042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3495858 |
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| End bp | 3496424 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644936579 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003093191 |
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| Protein GI | 255532819 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.578352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0375651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTAATA AGTTAAGCAG TTCAGTTCCA ACAGATAGAG AGGTTGTTTT AGGGATTCTA
AATAACTCGG AAGAAGCGCT AAATAAATTG TACACGGGAT ATTTCCCGAT GATTTTACAG
TTTATTTTAA ATAACAACGG TAATGAGGAT GATGCAAAAG ACGTGTATCA GGAAGGCATC
ATCGTTTTGT ACAATAAAAT TAAAGGCGGT AATTTTGAAT TAAGCAGTAA ACTCAAAACA
TACATCTACT CGGTTTGCCG GAGGATTTGG TTGAAAAAGC TTTCACAGCA GAGCAGGAAA
TCAAATGACC TTTCAGACTT TGAAGATGTA ATTGCTGTAG AAACAGATGT GGAACAGCAT
GAAGAAAAAG ATCAGCAATT TGAAAAAATG CAGTCCGCAC TTCTTCATCT TGGCGAACCC
TGTAAAACCA TTATTCAGGA TTTTTATATA AATAACCTTT CCATGCAGGA GATCTGTGAA
AAGTTTGGGT ATACCAATAC CGATAATGCC AAAACACAGA AGTATAAATG CCTGCAAAGG
TTAAAAAAGT TATTTTTTCA ATCTTAA
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| Protein sequence | MSNKLSSSVP TDREVVLGIL NNSEEALNKL YTGYFPMILQ FILNNNGNED DAKDVYQEGI
IVLYNKIKGG NFELSSKLKT YIYSVCRRIW LKKLSQQSRK SNDLSDFEDV IAVETDVEQH
EEKDQQFEKM QSALLHLGEP CKTIIQDFYI NNLSMQEICE KFGYTNTDNA KTQKYKCLQR
LKKLFFQS
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