| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2929 |
|---|
| Symbol | |
|---|
| ID | 8254040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3493736 |
|---|
| End bp | 3494680 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644936577 |
|---|
| Product | protein of unknown function DUF72 |
|---|
| Protein accession | YP_003093189 |
|---|
| Protein GI | 255532817 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1801] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00323068 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTTG GAAAGGTAGC TGCAACCGCA ATTGCTGGTG TCGATTTTGC ATTGCCCCCC
GATGGTAAAC AAACAGCCAT GACCCTGAAA GGGCTGAAGC CGGTTAAAAG CCCTGATTTT
TATATCGGCT GCGCCAAATG GGGCCGCAAG GAATGGGTAA ATATGATTTA TCCACCCAAA
ACAAAAGAAG CTGATTTTTT GGATGAATAT GTAAAACATT TCAATTCTAT AGAACTGAAC
GCTGTTTTTT ACAGTATCCC CAATGCCGAA CTGATCCGCA AATGGCGGAT CAAAGCAGAA
GAAAATTCAG GCAATGGCTT TGTTTTCTGT CCCAAGTTTT CCAGGACCAT CAGCCATATC
AAAAGGTTAA AGGATGCTGA AGTACCTACC GACCTTTACC TGTCGGGCAT CTCTGAATTT
GGTAAGTTCC TGGGACCCTG CTTTCTGCAG CTGGGCGATA ATTTTGGCCC CAAAAACTTT
GAGGTACTTG AAAATTACCT GAAACAACTG CCCAAAGACC TGGAAGTTTT TGTGGAACTG
AGACATGAAG AGTGGTTCTC GGACGCTGAA ATGCGTGCCA GGCTTTTTGA CATGCTGGCC
GGCTTAAAAA AAGGTGCGGT AATTACAGAT GCAAGCGGGC GTCGCGACTG TGTGCACATG
GAGCTGACCA TCCCTGAAAT ATTTATACGC TTTGTGGGCA ACGGACAGGA ATTTGCAGCG
TCCGACTTTG CGAGGATTGA TGATTGGACG GCCCGGATAA AGACCTGGCT GGATAAAGGC
CTAAAAAAGG TGTATTTTTT TCTGCACCAG CATGACGAGA AAGATACCCC GATCCTGGCC
GATTATACCA TACAACAATT TAACCAGCAT TTAGGCGCTA AAGTAGCGGC AATCAATTTT
ATTGACAAAC CTAAAGAAAT TACAAAACAA AGAGAATTAT TTTAA
|
|---|
| Protein sequence | MDFGKVAATA IAGVDFALPP DGKQTAMTLK GLKPVKSPDF YIGCAKWGRK EWVNMIYPPK
TKEADFLDEY VKHFNSIELN AVFYSIPNAE LIRKWRIKAE ENSGNGFVFC PKFSRTISHI
KRLKDAEVPT DLYLSGISEF GKFLGPCFLQ LGDNFGPKNF EVLENYLKQL PKDLEVFVEL
RHEEWFSDAE MRARLFDMLA GLKKGAVITD ASGRRDCVHM ELTIPEIFIR FVGNGQEFAA
SDFARIDDWT ARIKTWLDKG LKKVYFFLHQ HDEKDTPILA DYTIQQFNQH LGAKVAAINF
IDKPKEITKQ RELF
|
|---|
| |