| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2922 |
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| Symbol | |
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| ID | 8254033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3485369 |
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| End bp | 3486058 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936570 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_003093182 |
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| Protein GI | 255532810 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000498305 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTATAG CAGATAACTT ATTAAAATAT AAAAGCGAAC TGGACCCGGC AGGTGTTAAA
TTAATTGCAG TTTCCAAGTA CCAGGAAGCC GATGCAGTTT TAGAAGCCTA TAATGCCGGA
CAAAGGATAT TTGGAGAAAA CATTGTACAG GAACTGGTTG ATAAACAAGC TAAACTACCG
CAGGATATTG AATGGCACCT GATCGGTCAT TTGCAGACCA ATAAGGTGAA ATACATAGCA
CCATTTATCA GCCTGATCCA ATCTGTTGAC AGTTTAAAAT TACTGGCCGA GATCAATAAG
CAGGCGGCAA AAAACAAAAG GGTGATCGAT TGCCTGCTGC AGATCTATAT TGCAGATGAG
GATACCAAGT TTGGGCTGGG CTTTGACGAA GCGATAGAAC TGCTGCGTTC GGAAGAATTT
GAAGCCATGA AAAACGTGCG CATTACCGGG GTAATGGGCA TAGCCAGTAA CCATGCTTTG
GAAAAACAAA CATCAGATGA GTTTCATGAA CTTAAAGTGC TGTTTGACGG GATTAAACTA
AGCTTTTTTA GAAAGACTGC TCATTTTAAG GAGATTTCTA TGGGCATGTC GGGCGATTAT
AAACTGGCCG TTGAACAGGG CAGCACCATG GTACGCATAG GCAGCAGTAT TTTTGGAAAA
AGACGGATTA AACATTATAC AGTAGAATGA
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| Protein sequence | MSIADNLLKY KSELDPAGVK LIAVSKYQEA DAVLEAYNAG QRIFGENIVQ ELVDKQAKLP
QDIEWHLIGH LQTNKVKYIA PFISLIQSVD SLKLLAEINK QAAKNKRVID CLLQIYIADE
DTKFGLGFDE AIELLRSEEF EAMKNVRITG VMGIASNHAL EKQTSDEFHE LKVLFDGIKL
SFFRKTAHFK EISMGMSGDY KLAVEQGSTM VRIGSSIFGK RRIKHYTVE
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