| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2913 |
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| Symbol | |
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| ID | 8254024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3475404 |
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| End bp | 3477236 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644936561 |
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| Product | Carboxylyase-related protein |
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| Protein accession | YP_003093173 |
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| Protein GI | 255532801 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0995937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000519936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGGATATC AAAGTTTAGC AGATTGTGTT GCAGACCTGG AAAAACATGG TCATTTAATC
CGGATCAAAG AAGAGGTAGA TCCTTACCTG GAAATGGCTC AGATCCACCT TCGTGTTTAT
GAACAAAATG GCCCCGCATT GTTTTTTGAA AACATTAAGG GCAGTAAATT TCCGGCGGTT
TCCAATCTGT TCGGAACGCT TGAACGTGCT AAATTCATGT TCAGGGACAG TCTGCCCAAA
GTAGAACAGC TGGTAAACCT GCGTGCCGAT CCGATTAAGG CACTTAAAAA TCCTTTAAAA
TTACCGGGTA TCGGGTTTAC TGCCCTTACG GCCCTCCCTT TAAAGCTGAG TTTTAAGTCG
GTATTCAGTA AAACAAGCAT CAGCGCCCTC CCGCAGATCG TAAACTGGCC TATGGATGGC
GGGCCTTTTA TCACCATGCC GCAGGTGTAT ACAGAAGATA TAGACAAGCC TGGTATCCTG
AATGCCAATC TGGGCATGTA CCGGATCCAG CTGGCCGGCA ATGATTATAT CCGGGACAAA
GAAATTGGGC TCCACTACCA GATCCATCGT GGAATAGGGG TACACCAGAG TAAAGCCAAT
GCCAAAGGCC AGCCTTTAAA GGTCAGCATT TTTGTGGGCG GGCCACCTTC ACATCCGCTG
GCTGCGGTAA TGCCTTTACC TGAAGGACTT TCGGAAATGA CCTTTGCCGG TGCACTGGGC
AACAGAAGGT TCCGCTATTT TTACGACGAA GAAGGTTTTT GCCTTTCGGC CGATGCCGAC
TTTGTCATCA CCGGTATGGT CTATCCGCAG GAAAATAAAC CGGAAGGGCC TTTTGGTGAT
CACCTGGGTT ATTACAGCCT TACGCATCCT TTTCCCTTGA TGAAGGTGCA CAATGTATAC
CACCGCAAAG ATGCGGTCTG GTCGTTTACC GTAGTGGGCA GGCCACCCCA GGAAGATACC
AGCTTTGGCG CACTGATCCA TGAAATTGCC GGATCGGCCC TGCCCAAAGA GATCCATGGC
TTAAAAGAAG TTAATGCAGT GGATGCAGCA GGTGTACATC CTTTGCTTTT TGCCATAGGC
AGCGAAAGGT ATACTCCTTT TCTGAAAGAC CGCAGGCCAC AGGAGATCCT GACCATTGCC
AATCATATTC TAGGAAAAAA TCAGCTTAGT CTGGCTAAAT ATCTATTTAT TGCTGCCAGG
GAAGATGATG AACACCTGGA TACGCACGAT CTTTCTGCCT TTATGCAGCA TGTGCTTTCG
AGGATGGATT TCAGGACTGA TCTTCATTTC CATACCAACA CCACTATAGA TACGCTGGAT
TACAGTGGAG ATGGACTTAA CAGTGGTTCA AAAGTTGTTT TTGCCGCCGC AGGGGCACAA
AAAAGAATAC TGGCAAATGA GCTGCCCAAA GGCTTTAGCC TGCCTGAACC CTTTAACCAC
TACCAGATGG CCATTCCTGG CGTGCTGGCC CTTAAGGCCA GGCCTTATAC AGATCAGGGG
CATACCGAGC AGGAACTGGT ATTACTGGAA CAGCATTTAA AAGGTCAGCA GCTTGATGGT
CTGGCTTTAA TTGTACTTTG TGACGATCAG GAATTTACAG CCAGAAATAT CAGCAACCTG
GTCTGGGTTA CCTTTACACG GAGCAATCCG GCAGCAGATG TACATGGACT GGGCAGCTTT
ATCCACAATA AGCACTGGGG CTGCAGCGGG CCGCTGATTA TTGATGCCCG TAAAAAACCG
CACCATGCAC CCGAGCTGAT CAGGGATGAA AGGGTAGAAA AACACATAGA ACGGCTGGGG
CTTAAAGGGG CCTCTTTATA CGGTATACTA TAA
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| Protein sequence | MGYQSLADCV ADLEKHGHLI RIKEEVDPYL EMAQIHLRVY EQNGPALFFE NIKGSKFPAV
SNLFGTLERA KFMFRDSLPK VEQLVNLRAD PIKALKNPLK LPGIGFTALT ALPLKLSFKS
VFSKTSISAL PQIVNWPMDG GPFITMPQVY TEDIDKPGIL NANLGMYRIQ LAGNDYIRDK
EIGLHYQIHR GIGVHQSKAN AKGQPLKVSI FVGGPPSHPL AAVMPLPEGL SEMTFAGALG
NRRFRYFYDE EGFCLSADAD FVITGMVYPQ ENKPEGPFGD HLGYYSLTHP FPLMKVHNVY
HRKDAVWSFT VVGRPPQEDT SFGALIHEIA GSALPKEIHG LKEVNAVDAA GVHPLLFAIG
SERYTPFLKD RRPQEILTIA NHILGKNQLS LAKYLFIAAR EDDEHLDTHD LSAFMQHVLS
RMDFRTDLHF HTNTTIDTLD YSGDGLNSGS KVVFAAAGAQ KRILANELPK GFSLPEPFNH
YQMAIPGVLA LKARPYTDQG HTEQELVLLE QHLKGQQLDG LALIVLCDDQ EFTARNISNL
VWVTFTRSNP AADVHGLGSF IHNKHWGCSG PLIIDARKKP HHAPELIRDE RVEKHIERLG
LKGASLYGIL
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