Gene Phep_2901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2901 
Symbol 
ID8254012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3461737 
End bp3462924 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content48% 
IMG OID644936549 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003093161 
Protein GI255532789 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.255971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0133892 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG TAGTCATTGT TTCTGCTGTA AGAACCCCGA TTGGAAGTTT TGGAGGCTCA 
TTATCGGGCT TTTCTGCTAC CCAGCTGGGT GCTTTTGCCA TTAAAGCAGC TGTTGAAAGG
GCAGGGATTA AGCCGGGAGA CATCCAGGAG GTTTATATGG GCAATGTGTT ATCTGCCGGA
CTGGGACAGG CGCCCGCCAC GCAGGCAGCT AAATTTGCCG GTTTGCCGGA TGTACCTTCA
ACAACAATCA ATAAAGTATG TGCATCGGGT ACCAAGGCCA TTATGCTGGC CGCCCAAAGC
ATAGCCCTGG GCCAGAACGA TATCGTTGTG GCGGGTGGTA TGGAAAGCAT GAGCAATGTG
CCCTATTACC TGGACAAAGC CAGAAATGGT TACCGGCTGG GGCACGGACA AATTACAGAC
GGACTGGTAA AAGATGGGCT GTGGGACGTA TATAACGATT ATCACATGGG CGCTGCTGCT
GAACTTTGTG CTGCTGAATG TGGCTTTAGC CGCGAAGAGC AAGATGCTTT TGCGATCGGT
TCCTACAAAA AATCGCAGGC CGCACAAACA GAGGGCAGGT TTAACCAGGA AATTATTGCT
GTAGAAGTGA AAGACCGCAA AGGCGATACT ACAATGGTAG ATAAGGACGA AGAGCCATTT
GCCGTAAAAT TTGATAAGAT ACCTGGCCTT AAACCTGTAT TTAAAAAAGA TGGTACTGTA
ACAGCGGCAA ATGCGTCGAC CTTAAATGAT GGCGCTGCTG CACTGGTTTT AATGAGTGCC
GATAAAGCTG CAGCACTGGG TTTAAAGCCC CTGGCTAAAA TTTTAGCTTA TGCCGATGCC
CAGCAGGCAC CGGAATGGTT TACCACCGCA CCGGCAAAAG CCATCCCCCT GGCCTTAAAA
AAAGCCGGAA AAAGCATCGC TGATGTTGAT TATTTTGAAA TCAATGAAGC TTTTTCTGTA
GTTTCGTTAG CAAACAATAA AGAAATGGGT TTAAATGCAG AAAAAGTGAA CATTAATGGT
GGTGCGGTTT CAATGGGACA TCCCCTTGGT GCGTCCGGTG CCAGGATTGT GGTTACCCTG
CTTTCCGTTT TAGCGCAGCA ACATGGCAAA ATAGGCGTTG CCGGTATTTG TAATGGCGGC
GGCGGTGCCA GTGCCCCTGG TAATAGAAAA CATGAACTAA ATGATTAA
 
Protein sequence
MKEVVIVSAV RTPIGSFGGS LSGFSATQLG AFAIKAAVER AGIKPGDIQE VYMGNVLSAG 
LGQAPATQAA KFAGLPDVPS TTINKVCASG TKAIMLAAQS IALGQNDIVV AGGMESMSNV
PYYLDKARNG YRLGHGQITD GLVKDGLWDV YNDYHMGAAA ELCAAECGFS REEQDAFAIG
SYKKSQAAQT EGRFNQEIIA VEVKDRKGDT TMVDKDEEPF AVKFDKIPGL KPVFKKDGTV
TAANASTLND GAAALVLMSA DKAAALGLKP LAKILAYADA QQAPEWFTTA PAKAIPLALK
KAGKSIADVD YFEINEAFSV VSLANNKEMG LNAEKVNING GAVSMGHPLG ASGARIVVTL
LSVLAQQHGK IGVAGICNGG GGASAPGNRK HELND