Gene Phep_2875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2875 
Symbol 
ID8253983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3422843 
End bp3423790 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content45% 
IMG OID644936520 
ProductABC transporter related 
Protein accessionYP_003093135 
Protein GI255532763 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATC CTATTATACA ACTCAAAAGC CTGACTAAAT GTTATGGCAC GCAAAGGGCA 
GTTGATGACC TGAGCCTGGA CATCTATAAG GGAGAGATTT TTGGACTGCT GGGACCAAAC
GGCGCTGGCA AAACGACCAC CATACTGATG ATGCTGGGAC TTACCGATCC GACAAGCGGT
TCTGCATTTG TTTGCGGTTA TAACGCAACA AATAATCCGA TTGCTGTAAA AAGAAAGGTA
GGCTATATGC CAGACAGCCT GGGCTTTTAT GACAACATGA CTGCACTGGA AAACCTGAAG
TACATTGCAA GGCTGAACGG GCTGACCGAA AAGGAGATCA AGGTACGCAC GGTGGAGACA
ATGGAAACAG TAGGGCTTTC TGCTGCCTTG AACAAGAAAA CAGCTACTTT TTCCAGAGGT
ATGAAACAAC GTTTGGGCCT GGCCGATGTA TTGATTAAGC AGCCCGATGT GATCATTCTT
GATGAACCAA CTTTGGGGAT TGACCCTAGT GGCGTGCGGG AGTTTCTGGC ACTTATAAAG
CGCTTGAGCA AAGAGCAGGG ACTGACCGTT CTGCTTTCCT CGCATCATTT ACACCATGTA
CAACAGGTAT GCGATCGGGT AGGGATTTTT GTAAAAGGCA AACTATTGGC CCAGGGCAAT
ATCGATACCT TATCTGGCAA CGTGTTTAAC AACGCAGGGC ATGTTGTATC CATCAGGTTA
GCAAATGTCA TTCCTCAGCC CTGGGCATTG GAACAGGAGC TGGAACAATG GGAAACCATT
AAGCAGATCA GGATAAATGA AAAGACGATA GAATTTGAGT GTACGCAGGA CATTACGCCA
GCACTGGTCC GTTTTTTTGT GGAGAAGGGA TGCGACATTA CTGGCGTACA TCAAAAAGAT
TATGGCCTGG ATGACATTTA TCAAAAATAT TTTGAGGACA TTAATTGA
 
Protein sequence
MKDPIIQLKS LTKCYGTQRA VDDLSLDIYK GEIFGLLGPN GAGKTTTILM MLGLTDPTSG 
SAFVCGYNAT NNPIAVKRKV GYMPDSLGFY DNMTALENLK YIARLNGLTE KEIKVRTVET
METVGLSAAL NKKTATFSRG MKQRLGLADV LIKQPDVIIL DEPTLGIDPS GVREFLALIK
RLSKEQGLTV LLSSHHLHHV QQVCDRVGIF VKGKLLAQGN IDTLSGNVFN NAGHVVSIRL
ANVIPQPWAL EQELEQWETI KQIRINEKTI EFECTQDITP ALVRFFVEKG CDITGVHQKD
YGLDDIYQKY FEDIN