Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2875 |
Symbol | |
ID | 8253983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3422843 |
End bp | 3423790 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644936520 |
Product | ABC transporter related |
Protein accession | YP_003093135 |
Protein GI | 255532763 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATC CTATTATACA ACTCAAAAGC CTGACTAAAT GTTATGGCAC GCAAAGGGCA GTTGATGACC TGAGCCTGGA CATCTATAAG GGAGAGATTT TTGGACTGCT GGGACCAAAC GGCGCTGGCA AAACGACCAC CATACTGATG ATGCTGGGAC TTACCGATCC GACAAGCGGT TCTGCATTTG TTTGCGGTTA TAACGCAACA AATAATCCGA TTGCTGTAAA AAGAAAGGTA GGCTATATGC CAGACAGCCT GGGCTTTTAT GACAACATGA CTGCACTGGA AAACCTGAAG TACATTGCAA GGCTGAACGG GCTGACCGAA AAGGAGATCA AGGTACGCAC GGTGGAGACA ATGGAAACAG TAGGGCTTTC TGCTGCCTTG AACAAGAAAA CAGCTACTTT TTCCAGAGGT ATGAAACAAC GTTTGGGCCT GGCCGATGTA TTGATTAAGC AGCCCGATGT GATCATTCTT GATGAACCAA CTTTGGGGAT TGACCCTAGT GGCGTGCGGG AGTTTCTGGC ACTTATAAAG CGCTTGAGCA AAGAGCAGGG ACTGACCGTT CTGCTTTCCT CGCATCATTT ACACCATGTA CAACAGGTAT GCGATCGGGT AGGGATTTTT GTAAAAGGCA AACTATTGGC CCAGGGCAAT ATCGATACCT TATCTGGCAA CGTGTTTAAC AACGCAGGGC ATGTTGTATC CATCAGGTTA GCAAATGTCA TTCCTCAGCC CTGGGCATTG GAACAGGAGC TGGAACAATG GGAAACCATT AAGCAGATCA GGATAAATGA AAAGACGATA GAATTTGAGT GTACGCAGGA CATTACGCCA GCACTGGTCC GTTTTTTTGT GGAGAAGGGA TGCGACATTA CTGGCGTACA TCAAAAAGAT TATGGCCTGG ATGACATTTA TCAAAAATAT TTTGAGGACA TTAATTGA
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Protein sequence | MKDPIIQLKS LTKCYGTQRA VDDLSLDIYK GEIFGLLGPN GAGKTTTILM MLGLTDPTSG SAFVCGYNAT NNPIAVKRKV GYMPDSLGFY DNMTALENLK YIARLNGLTE KEIKVRTVET METVGLSAAL NKKTATFSRG MKQRLGLADV LIKQPDVIIL DEPTLGIDPS GVREFLALIK RLSKEQGLTV LLSSHHLHHV QQVCDRVGIF VKGKLLAQGN IDTLSGNVFN NAGHVVSIRL ANVIPQPWAL EQELEQWETI KQIRINEKTI EFECTQDITP ALVRFFVEKG CDITGVHQKD YGLDDIYQKY FEDIN
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