Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2873 |
Symbol | |
ID | 8253981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3421430 |
End bp | 3421855 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644936518 |
Product | histidine triad (HIT) protein |
Protein accession | YP_003093133 |
Protein GI | 255532761 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.635304 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTACGC CTATTTCAGA ATGTTTGTAT TGCCAAAACA ATGAAACATT ACACCGTTTA ATGATTAAAG TTGGAGATTT AGAAGTATCT CAATTGTTTC TGTTTAAAGA GCAATCACAT CCGGGTCGCT GTAATGTGGT CTATAAAGAC CATGGAATTG AGTTCCATGA ATTGAGTGAT GAGCAACGTA ATGCATTTAT GAAAGATGTG GCAAAGGTAG CAAAGGCTAT TGCTGCTGTA TTTAATCCTG ATAAAATCAA CTATGGGGCC TATGCGGATA CCCTGTCTCA TTTACACATG CATATTGTTC CTAAATATAA AGACGGCTAC GGATTTGGTG CTGTTTTCGA AATGAACCCG CAAAAAGTTG CGCTTTCTGA TGTTGAATAT TCAGAAATTA TCGATAAAAT TAAAGCAGCG CTTTAA
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Protein sequence | MPTPISECLY CQNNETLHRL MIKVGDLEVS QLFLFKEQSH PGRCNVVYKD HGIEFHELSD EQRNAFMKDV AKVAKAIAAV FNPDKINYGA YADTLSHLHM HIVPKYKDGY GFGAVFEMNP QKVALSDVEY SEIIDKIKAA L
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