Gene Phep_2873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2873 
Symbol 
ID8253981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3421430 
End bp3421855 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content37% 
IMG OID644936518 
Producthistidine triad (HIT) protein 
Protein accessionYP_003093133 
Protein GI255532761 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.635304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACGC CTATTTCAGA ATGTTTGTAT TGCCAAAACA ATGAAACATT ACACCGTTTA 
ATGATTAAAG TTGGAGATTT AGAAGTATCT CAATTGTTTC TGTTTAAAGA GCAATCACAT
CCGGGTCGCT GTAATGTGGT CTATAAAGAC CATGGAATTG AGTTCCATGA ATTGAGTGAT
GAGCAACGTA ATGCATTTAT GAAAGATGTG GCAAAGGTAG CAAAGGCTAT TGCTGCTGTA
TTTAATCCTG ATAAAATCAA CTATGGGGCC TATGCGGATA CCCTGTCTCA TTTACACATG
CATATTGTTC CTAAATATAA AGACGGCTAC GGATTTGGTG CTGTTTTCGA AATGAACCCG
CAAAAAGTTG CGCTTTCTGA TGTTGAATAT TCAGAAATTA TCGATAAAAT TAAAGCAGCG
CTTTAA
 
Protein sequence
MPTPISECLY CQNNETLHRL MIKVGDLEVS QLFLFKEQSH PGRCNVVYKD HGIEFHELSD 
EQRNAFMKDV AKVAKAIAAV FNPDKINYGA YADTLSHLHM HIVPKYKDGY GFGAVFEMNP
QKVALSDVEY SEIIDKIKAA L