Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2797 |
Symbol | |
ID | 8253905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3311957 |
End bp | 3312721 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936443 |
Product | regulatory protein DeoR |
Protein accession | YP_003093058 |
Protein GI | 255532686 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCTA ATCAACGAAA AGACAAGATA CTGGAACTGT TAAAAGAGGA TGGATCTGCA AAGGTGGTAA ACCTTGCAAA ACTCTTTAAA GTAACAGAAG TGACCATCCG GCAGGACCTG GAAAAACTGG AAAAAGAAGG TCTGGTACTT AGGGAACACG GTGGTGCCTT TTTAAAGAAC ATGGAAAACC AGGTGCGCAC ATTTTCCTTA AGCCATCAGG ACCACCTGGA CAAAAAGGAA TTGATCGCAA AAAAATGCCT CGAATTTATA GAAGCAGGAG ATACCATTAT CCTCGACTCG GGCTCTACTA CTACCGAAAT CGCTAAAAAA CTAAAAGGAA TTAAAAATTT AACGGTCATA ACCAATGCCT TAAATATTGC TTTGCTGCTG GGTGTAGAAC CCGGAATTGA AGTAATCATG ACAGGTGGAG AATTTAAGCC ACCTACCCTA TCGTTAACGG GACAAAAGGC CGCCGATTTT TTTAACGGGC TAAACGTGCA TAAACTTTTT CTTGCCACAG CCGGCCTGTC ACTCAAAGCC GGGTTAACCT ACCCGAGCAT TAGCGACCTG GTGGTGAAAA AGGCAATGAT CAACGCAGCC GAGACCACTT ATTTAGTGGC AGATTCTACC AAAATCGGGA AAAGCTCTCT GGCCAGCCTG GGTGCATTGT CGCTCATAGA TTACATCATT ACTGATGCAG GCATACAGGA AAAATATAAG AACTTATTAA ACGAAAACGA AATAGAGCTG ATCATAGCAG ACTGA
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Protein sequence | MLANQRKDKI LELLKEDGSA KVVNLAKLFK VTEVTIRQDL EKLEKEGLVL REHGGAFLKN MENQVRTFSL SHQDHLDKKE LIAKKCLEFI EAGDTIILDS GSTTTEIAKK LKGIKNLTVI TNALNIALLL GVEPGIEVIM TGGEFKPPTL SLTGQKAADF FNGLNVHKLF LATAGLSLKA GLTYPSISDL VVKKAMINAA ETTYLVADST KIGKSSLASL GALSLIDYII TDAGIQEKYK NLLNENEIEL IIAD
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