Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2796 |
Symbol | |
ID | 8253904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3308834 |
End bp | 3311644 |
Gene Length | 2811 bp |
Protein Length | 936 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936442 |
Product | hypothetical protein |
Protein accession | YP_003093057 |
Protein GI | 255532685 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAT GCGCTTTTAT TTTACTTGCC CTTGCCATGT TTGGAACCAC TCAAATTAAT GCTCAAAACA AACCTTCAAA ACCAGTTGCC CCTCCATTAC CATTACGGGA AATCAGCGGT ATTGTAAAAG ACAGTACTGA TTTAGAGGTG ATTGGTGCAA CTGTAAGTCT TACTTCAGAT AAAGACACTT TAAAGACGGC TACCAATAAT AATGGGGTGT TTGTATTTAA AAATGTAAAA TCGGCCACCT ATACCATCGT AGTCCAGAGC ATCGGGTATA TGAAAACGCC TGCAATGCTT TTTAAGCAGA ACGACCGCAT ACCAAGAATT GTGATGGATC CTATTGTGCT TAAAGAAGAA AAAAACACTT TAAATACGGT GGTCATTAAT GGAGAACCCT CTATTACCTA TAAAACAGAT ACCATAGAAT ATAAGGCGAG TGATTATGTA GTGCGGGAGA ATTCGACCGT GGATGAATTG TTGAAAAAGA TGGAAGGGAT GGAAGTTGGA ACAGATGGTA GCCTTGTGCA CAACGGTGAG GCCGTTTTAA AGGCCAAGCT AAACGGAAAA GAATATTTAG GGGGTGATGT GGCCAATGCC ATTAAAAACC TGCCTGCCGA AATTGTAGAT AAGATCCAGA TTGTAGATGA TTATGGCGAT GAAGCTGCAC GTACAGGAGT TAAAGATGGA GATCCTCAAA AAATACTGAA CATCACTACA AGGACAGATA AATCGGTAGG TAACCTGTTG CGGTTAAACA CTGCAGGAGG AAACAATAAA CGTTATGATG CAGGTATTTT TGGGACAAGG ATCAATGGCA ATCAGCAGAT TGGTGTTAGG ACAGGCTACA AAAACACCGT AAATGGTGTT GCCGGAAGTG GTGGGGGTGG CGGAACAGGT GGCACAACGA ACGATGGGAA TGCTTCCTTC AGTATCCGTG ATAAAATAGG AAAGAAGATT GAGGTTAACA TGAATTACGG ATTTAACGGA AACGATATAA ATGCTTTAAA CAGTAGCTTT ACACATTCAT TTACCAATTT CAGAGATCCT GTAACGCAAA AAGATACTTT AATTGCCACC AATACCACCA GGGGCAATGT AAGTGATAAC AATTCGAAAA ACCACAACTT TAAGGCCGAT ATAGATTTTG AACTGGACAG CAATAATTTC ATTAATTTCT CGCCATCAAT TAATTATAGT TCTTCGCTAA GTTTAAGGTC TGATTCTTCT TACCAGACGG GTTTCCGGCA TCAGCGCCAG ATCAGCTCAA ATGCAAGTAC AAATACCAGG CCCCAGCTGG GTGCTGCGAT CAGTTATACC CATCGGTTTG GCAATAAAAG AAGGAGATTG TCCTTACATG CCAATTTAAA CAGCAATAAC AATGATGTGG AACAGCAACG GGAGGCCAAT ATTGTTTATT TTCTAAATGA GGACGAAACG GAGCGCAGGG ATTCCCTGGT CAACAGGATC ATTGCGCGAA AAAACCTGCA AAATACATAT AGGGGTAGTA TAACTTATGT AGAGCCACTG TCGTTAAATA CACAGCTGGA ATTGAATGCC CAGTTAAATT ACAATGGTTA CAGTAATGAT GCCACCACAA GGAATGTGAC GCCCACCGGT TATTCGGAAG TGATTGATTC TTTAAGTAAT ATTTTTGATT ATTCTTTTAC CCAGGCGCGC ATTTCACTCA ACTTCAGATA TGGTATGGTG AATACCTCCA AATTCAGGTT TTCGGCTGGT TTAACCGGAA TACCATCTTT GCTTTCCGGC ACCAAAGTAA GTCTGGGCAC CAGCACTGAA CGTAAGAGTT TTAACCTGAT CCCCATTGCA AGAATGGAAT ATTTATGGTC CAGACAGCAT AAAATTTCCC TTAATTATTC CGGTTCTGCA AATGAGCCTT CGTTTGACCA GATCCAGCCT GTAAAAGATG TAAGCAACCC TCAAAACCCT AGAATTGGTA ATCCTGACCT GAAAGCATCG TTTACACATA CCATAAGGTC GGAGTACAAC AACTACCTGG CAGATATTAA GATGAATTAT TCACTAAACA TGAATGCTTC TTTTACGCAG AACAGTGTGG TAAACAATAC GATAGATGTG CTGGATCCAA ATGTGGTAGT CGGGCCCAAC CAGAAAGCGG TATACATTTC TGAAACGAGG TACATCAATG TGAACGGTTC CTATCGTCTG GCAGGAAATT ACTCTGTCAG CAGGCAATTT GGCAACCGCA AATACAATTT ATCATTCAGT GGTTCTGCAA ATTACAACCA TCGGATTTCA ATGAGCAACG GCGACCAGAA TATCAATACG GTTAAAACTT TTATTGAGCG TTTCGGACCA AGGATTAACC CTTCAGATTG GTTTGAGGTG AATCCTTATG TTTCGCACAA TTATACTAAA TCTGAAAACA CCCTTTTAAA AAATCAAAAT GAGACCAGTA CGCTTGCATT CAATGTGGAT GGGAAAATAT ATTTTCTGAA AAGCTGGTTG TTTGGCTACA GCGCCAGTAA AAATTATGTA AGCGGTATCA AGGCCAATCT GACCAGCAAC CCTTTTGTAG TAAATGCTTA TCTTGAAAAA GAATTGCTTA ACCGAAGGGG AAAAATCTCT TTGCATGCTT TTGATATCCT GAACCAGAAT AATTTTGTAA ACCGTGATTA TAATGACAAC GGGGGATATA CAGATACAAA GTCCAATGCG CTTAGCCAGT ATTTTATGCT TCGTTTAAGC ATGCGCCTGC AGAAATGGAG CGGGGCGAAG GGGCGTAAGG GACAACCGAT ACGGAGAAGA GGGGACGGGA GTTTTATGTA A
|
Protein sequence | MKKCAFILLA LAMFGTTQIN AQNKPSKPVA PPLPLREISG IVKDSTDLEV IGATVSLTSD KDTLKTATNN NGVFVFKNVK SATYTIVVQS IGYMKTPAML FKQNDRIPRI VMDPIVLKEE KNTLNTVVIN GEPSITYKTD TIEYKASDYV VRENSTVDEL LKKMEGMEVG TDGSLVHNGE AVLKAKLNGK EYLGGDVANA IKNLPAEIVD KIQIVDDYGD EAARTGVKDG DPQKILNITT RTDKSVGNLL RLNTAGGNNK RYDAGIFGTR INGNQQIGVR TGYKNTVNGV AGSGGGGGTG GTTNDGNASF SIRDKIGKKI EVNMNYGFNG NDINALNSSF THSFTNFRDP VTQKDTLIAT NTTRGNVSDN NSKNHNFKAD IDFELDSNNF INFSPSINYS SSLSLRSDSS YQTGFRHQRQ ISSNASTNTR PQLGAAISYT HRFGNKRRRL SLHANLNSNN NDVEQQREAN IVYFLNEDET ERRDSLVNRI IARKNLQNTY RGSITYVEPL SLNTQLELNA QLNYNGYSND ATTRNVTPTG YSEVIDSLSN IFDYSFTQAR ISLNFRYGMV NTSKFRFSAG LTGIPSLLSG TKVSLGTSTE RKSFNLIPIA RMEYLWSRQH KISLNYSGSA NEPSFDQIQP VKDVSNPQNP RIGNPDLKAS FTHTIRSEYN NYLADIKMNY SLNMNASFTQ NSVVNNTIDV LDPNVVVGPN QKAVYISETR YINVNGSYRL AGNYSVSRQF GNRKYNLSFS GSANYNHRIS MSNGDQNINT VKTFIERFGP RINPSDWFEV NPYVSHNYTK SENTLLKNQN ETSTLAFNVD GKIYFLKSWL FGYSASKNYV SGIKANLTSN PFVVNAYLEK ELLNRRGKIS LHAFDILNQN NFVNRDYNDN GGYTDTKSNA LSQYFMLRLS MRLQKWSGAK GRKGQPIRRR GDGSFM
|
| |