Gene Phep_2778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2778 
Symbol 
ID8253886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3280414 
End bp3281808 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content47% 
IMG OID644936424 
Producthypothetical protein 
Protein accessionYP_003093039 
Protein GI255532667 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3458] Acetyl esterase (deacetylase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGA TAGCTTTATT TCTGGTGGCA ATGGGTTTAA GCAGTATATT GCTGGCACAG 
ACCCAAAATT CGGATAGCCT GTACAGGCAG CCGCTTAAAA CTGTTTTATC GGAAATAGAA
GGCCGTTTCA AAGTAAAAAT AAAGTATAGT GAAAACCAGG TGAACAACCG TTGGGTAAAC
TATGCCTTAT GGCGCTTCAG ACCCGATGTT GACGAAACAC TGGCCAATGT GCTCGCACCG
CTCGACATGA AGGTCAATAA GGAAAAAGAA GGTGTTTACA AATTAAAAGA ATACGAATAT
TACCGCTGGA ATGCAGCAGA GGGCCAGGCT ACCCTAAACC ATCTGGCCTC ACTGTACCAG
GATAAAGCCA GCTGGGAGAA ACGCAAGGCC TTGATCAGGC CATTGTTGTA CCAGGCACAG
CAATTGTCGC CCTTACCTGC AAAACCTTTA TCTAAACCCA TCATTACACC AAAAAGAGTA
ATGGATGGCT ATACAGTAGA GAACATTGCG ATAGAAATAT TGCCCGGCCT GTACATCAAT
GGTTCTTTAT ACAGACCCTC GAAAATCAGG GGAAAAATAC CTGTAATGCT TAGTCCGGAC
GGGCATTGGG CGCAGCAACG TTACCGTGCC GATTGCCAGC TGCGTTGTGC TACCATGGCC
CGTATGGGGG TAATGGCCTT CAGTTACGAC CTTTTTGCCT GGGGTGAATC GCTGTTGCAG
TTTAAACCGG AAGACCACAG GCGAAGCCTG GCACAAACGA TACAAACCTT AGGTGGCATC
AGAATACTGG ATTATGTATT GTCCCTTAAA GAAACAGATC CGGGCAGGGT GGGCATTAGT
GGAGGATCGG GTGGCGGAAG CCACACTGTA TTGATGGCCG CCATGGACGA TCGGATCAAA
CTCAGTGCAC CTGTAGTTTC GCTTTCTTCT TCATTTTATG GAGGTTGTCC TTGTGAAAGT
GGCATGCCGA TACACCTTTG CGCAGGTGGA ACCAATAATG TGGAGCTGGC CGCGATGGCG
GCACCAAATC CTCAGTTGGT CGTCTCAGAT GGTCAGGACT GGACGGTTAC CGTACCTGGG
CAGGACATGC CTTTCCTGAA AACGATATAT GGTTATTACG GAAAGCCTGA ACGGGTTGAA
AATGTGCATC TGCCGGAAGA AGGACACGAC TTCGGTTATT CCAAGCGAAA GGCCCTGTAT
GATTTTTTAG TGCAGAATTT CAAACTTGAT GTTGCCGGAG TAAAAGATAA AGATGGCAAA
TACGATGAAA GTAAATGTAC CATTGAAAAA GAACCTGCCA TGTATGTATT CGGCGAAAAG
GCTGAGCGTT TGCCTGCAAA TGCCATAAAG GGTTTTGAGC AACTGGAACA AGTATTTAAA
GCCGCAACAA AATAA
 
Protein sequence
MKRIALFLVA MGLSSILLAQ TQNSDSLYRQ PLKTVLSEIE GRFKVKIKYS ENQVNNRWVN 
YALWRFRPDV DETLANVLAP LDMKVNKEKE GVYKLKEYEY YRWNAAEGQA TLNHLASLYQ
DKASWEKRKA LIRPLLYQAQ QLSPLPAKPL SKPIITPKRV MDGYTVENIA IEILPGLYIN
GSLYRPSKIR GKIPVMLSPD GHWAQQRYRA DCQLRCATMA RMGVMAFSYD LFAWGESLLQ
FKPEDHRRSL AQTIQTLGGI RILDYVLSLK ETDPGRVGIS GGSGGGSHTV LMAAMDDRIK
LSAPVVSLSS SFYGGCPCES GMPIHLCAGG TNNVELAAMA APNPQLVVSD GQDWTVTVPG
QDMPFLKTIY GYYGKPERVE NVHLPEEGHD FGYSKRKALY DFLVQNFKLD VAGVKDKDGK
YDESKCTIEK EPAMYVFGEK AERLPANAIK GFEQLEQVFK AATK