Gene Phep_2749 details

Gene Information

• Locus tag: Phep_2749
• ID: 8253857
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pedobacter heparinus DSM 2366
• Kingdom: Bacteria
• Replicon accession: NC_013061
• Strand: -
• Start bp: 3247888
• End bp: 3251307
• Gene Length: 3420 bp
• Protein Length: 1139 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 644936397
• Product: glycoside hydrolase family 2 sugar binding
• Protein accession: YP_003093012
• Protein GI: 255532640

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0806564
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 37
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATTTGA ACTTAAGTAA AACCATAGCA TTCGTTTTAT TGACTTGCAG CCTGCAGCCT 
GGCGCAGCTA TGGCGCAGGC AAATGAGTCT GCTAAGCCCT GGGTATTATG GCACTGGATT 
AAAGGCGGGG TTTCAAAACC AGGTATTACC GCCGATCTGG AAGCCATGAA GTCAGCGGGC 
ATCGGAGGTG CATATCTTTT ATCGATTAAA GATGTACCCA ATCCCCCTTT ATTTAACCCA 
TCTGTACGGC AGCTTACCCC ACAATGGTGG GACATGGTAA CCTTTGCCAT GCAGGAGGCC 
AGGCGTTTAA ACCTGAAACT GGGGATGCAT GTAAGTGATG GCTTTGCACT TGCAGGAGGG 
CCCTGGATTA CACCTGAACT TTCTATGCAG AAAGTGGTAT CTACCCAATT GAATATCAAG 
GGTGAAACAG CTGAAAAAAT AAAACTGCAG CAACCGGAAA CCCTGGAAGG TTATTATAAA 
GACATTGCGG TATACGCCTA TCCCTCAGCT GAAGGTGCCG GTATTTCCAC ACAGACTGTG 
ATTCCCGAAA TTACGACCAG TAATGCTGCA GATGCAAGCG GACTGATCAG ACCGGGTAAT 
ACGAAAAATT TTGGAAGTAA TGAAGCCTGC TGGATTCAGT ATGCTTTTAA ACAGCCTTTT 
ACCACCCGCA CCATCCGCAT AAGTACTGGC AGCAATAACT ACCAGGCACA ACGGCTGGAA 
ATACAGGTTA GTGATGATGG TGAAAATTTC CGTTCGGTGG GGCGCCTGGA GCCGCCAAGG 
CATGGCTGGC AGGACACTGA TGCCGATGTG ACACATAGTA TTGTACCCGT TACCGCAAGA 
TATTACCGCT TCGTATACGA TAAAAAAGGA TCGGAGCCCG GTTCAGAAGA TCTGGACGCC 
GCCAAATGGA AGCCTTCTTT AAAACTGAGG AACCTGGAGC TTTCTGCGGA AGCCAGGATC 
AACCAGTTTG AGGGAAAAGC TGGCTTGGTA TGGCGCATCA GCAAAGCCAG CACAAAAGAG 
ACGCTGGAAG ACCATTTATG TGTACCGATA GATAAGATCA TCAACCTGAG CGATAAAATT 
AAAGCAGACG GCAGCTTAGA CTGGAAGGCG CCTAAAGGAA ACTGGACCAT ATTGAGGATT 
GGCCATACTT CCACCGGTCA TAAGAATGCC ACTGCCGGAG CAGGTATGGG GCTGGAATGT 
GATAAATTTA ATCCGGCTGC AGTAAAATTA CAATTTGACA GCTGGTACGG GGCAGCCTTA 
AAACATGGAG GACCTGAAAT CGCCTCAAAG GTTTTGAATG AATTGTTTGT TGACAGCTGG 
GAGTGTGGCA GCCAGAACTG GTCGCCACTT TTTGCAGCGG AATTTAAGAA ACGCAGGGGC 
TACGACCTGA TGCGTTATCT GCCGGTTATG GTAGGCATAC CGCTTGGAAG TGTTGAGCTG 
TCTGAAGCCT TTTTACATGA TGTGCGAAAA ACCATTGCTG AACTGGTTGC AGACCAGTTT 
TACTACACCT TATCCAGCCT GACCAAAGAG AAAGGTGTCA CTTTTGCCGC TGAGAATGTT 
GCACCGACCA TGCTGAGCGA TGGCCTGCTG CATTATAAAA ATGTAGACAT GCCGATGGGT 
GAGTTCTGGT TGAACAGTCC GACACACGAT AAACTGAACG ACATGCTGGA TGCGGTTTCC 
GGCGCGCACA TTTATGGCAA AAATATCATA CAGGCAGAAG CTTTCACCAC CATTAGGATG 
GATTGGAATG AACATCCCGG CAATATGAAG ACCTTACAGG ATAGAAATTA TGCGCTGGGC 
ATCAATAAAC TGGTATATCA TGTTTTTGCC CATAATCCAT GGCTGGACCA AAAGCCAGGG 
ATGACACTGG ATGGGATAGG TTTATATTTT CAGCGTGACC AGACCTGGTG GAAACTTGGA 
AAGGCCTGGG TAGATTATGC CACACGTTGT CAGGCACTTT TACAACAGGG TAAGCCTGTA 
GCCGATGTCG CGGTATTTAT TGGTGAAGAA TTGCCCAGCC GCTCGGTATT ACCTGATCGG 
TTGGTTAACC TGCTGCCTGG CCTTTTTGGT GCTGAAGTGG TGGCAGCTGA GGCAAAAAGA 
CTGGCCAATA CCGGCGAGCC CTTAAGACAA AAGCCTGCAG GGGTAACACA TTCGGCAAAC 
ATGGCCGATC CGGAAGACTG GGTAAATCCA TTAAGAGGCT ATGCCTACGA TTCTTTTAAT 
CCTGATGTAT TGCTTGACGC AAGTGTAAAA GACGGGAGAG TGGTGTTTGC CAGCGGTGCA 
AGTTATGCGG TACTGGTTAT CCCGGGTAAA ATGCTCCTGA ACCCAAATTA TCAGTATATG 
AGTAAGGAAG TGGCTGCAAA GCTGAACGAG CTGGCGAAAG CAGGTGCAAG CCTTGTGCTC 
GGTGAACGTC CGAAATTCCA GCTGGGTATG CCTAAAACAG GCAGTGATCA GGACTTTGAG 
ACTTTACTGA CCGAGCTTTG GGATGGTAAT TTTAAAACAG CAGGACAGGG GCAACAGCAG 
CTTTCCCTGA AAACACTGGG TAAGGGAAGG ATCATTAAGG GTGCTTATCA GGCAGAAAGT 
TTTGACCTTA TTGGCCTGGA AAGGGATCTG CTGGTAATGG AAGGAAATGG AGATTATGCG 
AAAAAGGTAG CTTATACCCA TAGGATTGCA GCCGATAAAG AGTTTTATTT TGTTGCTAAC 
CAGGAAAATA AAAAGCGCTT GCTGGAGTTT TCTTTTAGAA CAGCCGGTAA AATACCTGAA 
CTTTATGATG CTGTAACTAA TGAAACTATT GCCCTGAAAG CCTGGAAAAC TGAGGCTGGT 
CGTACAAGAA TGCAGCTAAA GCTGGCCCCA AATGCCTCCG CCTTTGTCAT CTTTAAAGAT 
AGAGCGGCTA CTACTGCCTC TGCTACAGGC AAAAACTGGA AAGAACAGCA ATTGGTAAAC 
ACGATAAATG GGAGCTGGAA AGTACGTTTT GACCCTGCTT ATGGCGGTCC GGAAAAGCCG 
GTAACTTTTG CTGCGCTGAG CGATTGGAGT AAACATCCGG ACAGCCTGAT CAGATATTAC 
TCAGGTTCAG CGGAGTATAG TAATAATTTT AAAGTTAAAA AACAGGCCGG GCAGCAATAC 
TTGCTGGATT TGGGAACGGT AGGCTGTATC GCAGAGGTTC GGGTAAACGG AATTTCTTGT 
GGTGTGGTCT GGACTGCGCC TTACCAGGCC GACATTACAG CTGCTCTAAA AAATGGGGAC 
AATGTGCTGG ACATAACGGT AACCAATACC TGGGCCAACA GGATCATCGG CGATCAGCGT 
TTGCCGGAAG ACAGGAGAAT CACAAAAACA AATGCGCCAT ACCGTTTGGA AGGCAAGCCA 
CTGAATGAGG CTGGCTTGCT TGGTCCGGTA AGGCTATTTA AACAGGAACA ATCAAATTAA 

 

Protein sequence

MNLNLSKTIA FVLLTCSLQP GAAMAQANES AKPWVLWHWI KGGVSKPGIT ADLEAMKSAG 
IGGAYLLSIK DVPNPPLFNP SVRQLTPQWW DMVTFAMQEA RRLNLKLGMH VSDGFALAGG 
PWITPELSMQ KVVSTQLNIK GETAEKIKLQ QPETLEGYYK DIAVYAYPSA EGAGISTQTV 
IPEITTSNAA DASGLIRPGN TKNFGSNEAC WIQYAFKQPF TTRTIRISTG SNNYQAQRLE 
IQVSDDGENF RSVGRLEPPR HGWQDTDADV THSIVPVTAR YYRFVYDKKG SEPGSEDLDA 
AKWKPSLKLR NLELSAEARI NQFEGKAGLV WRISKASTKE TLEDHLCVPI DKIINLSDKI 
KADGSLDWKA PKGNWTILRI GHTSTGHKNA TAGAGMGLEC DKFNPAAVKL QFDSWYGAAL 
KHGGPEIASK VLNELFVDSW ECGSQNWSPL FAAEFKKRRG YDLMRYLPVM VGIPLGSVEL 
SEAFLHDVRK TIAELVADQF YYTLSSLTKE KGVTFAAENV APTMLSDGLL HYKNVDMPMG 
EFWLNSPTHD KLNDMLDAVS GAHIYGKNII QAEAFTTIRM DWNEHPGNMK TLQDRNYALG 
INKLVYHVFA HNPWLDQKPG MTLDGIGLYF QRDQTWWKLG KAWVDYATRC QALLQQGKPV 
ADVAVFIGEE LPSRSVLPDR LVNLLPGLFG AEVVAAEAKR LANTGEPLRQ KPAGVTHSAN 
MADPEDWVNP LRGYAYDSFN PDVLLDASVK DGRVVFASGA SYAVLVIPGK MLLNPNYQYM 
SKEVAAKLNE LAKAGASLVL GERPKFQLGM PKTGSDQDFE TLLTELWDGN FKTAGQGQQQ 
LSLKTLGKGR IIKGAYQAES FDLIGLERDL LVMEGNGDYA KKVAYTHRIA ADKEFYFVAN 
QENKKRLLEF SFRTAGKIPE LYDAVTNETI ALKAWKTEAG RTRMQLKLAP NASAFVIFKD 
RAATTASATG KNWKEQQLVN TINGSWKVRF DPAYGGPEKP VTFAALSDWS KHPDSLIRYY 
SGSAEYSNNF KVKKQAGQQY LLDLGTVGCI AEVRVNGISC GVVWTAPYQA DITAALKNGD 
NVLDITVTNT WANRIIGDQR LPEDRRITKT NAPYRLEGKP LNEAGLLGPV RLFKQEQSN