| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2740 |
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| Symbol | |
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| ID | 8253848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3234581 |
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| End bp | 3235369 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644936388 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003093003 |
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| Protein GI | 255532631 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.046244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTAC AGTTAAAAGA AAAGGTCATT GTGATTACCG GTGGGGCCAA AGGAATAGGA
AAAGCCATGG CGCAGGTATT TGCAGCCGAG GGTGCAACTG CGGTAATTGT AGGACGAAAA
GAAATCGATA ACCTGAAAGT GGTGGAAGAA ATAACCTCGG CCGGGGGCAA AGCGTTTCAG
GTTGCAGCGG AGCTGAGCGA TCCGGATGCC TGTGAAAATG CGGTGAAAGC CATTGTTGGT
GCCTTTGGCC GGATAGATGG ATTGGTGAAC AATGCTGGTG TAAATGATGG GGTGGGGCTC
GAAAATGGGA ATTACAAAGA TTTTATGGCC TCCCTGCATA AAAACGTAGT GCATTATTTT
TTAATGGCCC ATTTTGCACT GCCCGAACTG AAAAAGAGCA AAGGCGCCAT CGTAAACATA
ACCTCTAAAA CTGCCGAAAC CGGACAGGGT AATACGTCAG CTTATGCTGC GGCCAATGGG
GGCAGAAATG CGCTGACCAG GGAATGGGCG GTAGAACTCC TGAAATATGG CATTCGGGTA
AATGCAGTGG TGGTTGCAGA ATGCTGGACA CCGGCTTATG AAACCTGGAT AGCAACCCTT
TCGGACGCGG AAGAAAAGCT GAAAGAGATC ACCGACAAAA TACCTTTCGA AAACAGGATG
ACCACAGCAG AAGAAATTGC CAATATGGCT GCTTTCCTAA TGTCAGCCAG GTCAAGCCAC
ACTACCGGGC AGATCATCCA TGTGGATGGG GGATATGTAC ACCTGGACAG GGCGCTGGCC
AACGCATAA
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| Protein sequence | MDLQLKEKVI VITGGAKGIG KAMAQVFAAE GATAVIVGRK EIDNLKVVEE ITSAGGKAFQ
VAAELSDPDA CENAVKAIVG AFGRIDGLVN NAGVNDGVGL ENGNYKDFMA SLHKNVVHYF
LMAHFALPEL KKSKGAIVNI TSKTAETGQG NTSAYAAANG GRNALTREWA VELLKYGIRV
NAVVVAECWT PAYETWIATL SDAEEKLKEI TDKIPFENRM TTAEEIANMA AFLMSARSSH
TTGQIIHVDG GYVHLDRALA NA
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