| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2698 |
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| Symbol | |
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| ID | 8253806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3165693 |
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| End bp | 3168299 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644936346 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003092961 |
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| Protein GI | 255532589 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.447699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.17136 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGAT ACAGTATATT GCCTGTTCTG GCCATCTTTT GCATATCATC GGATGCCATA
GCGCAGGAGC AAAAGGGAAC AGCATTAAAA TTATGGTATA CCCAGCCGGC AAAGGTTTGG
GAAGAAGCCC TTCCGCTGGG AAATGGCAAA ACCGGGGCCA TGGTTTTTGG AAGGGTAAAT
AAAGAACGTT TCCAGCTAAA CGACAATACC TTATGGTCGG GAAGCCCCGA AGCCGGGAAT
AACCCCAAAG GTCCTGCCAA CCTGCCCCTG GTAAGACAGG CAGTTTTTGA AGGAGATTAT
GCCCGGGCGG CGGCGCTCTG GAAAAAGAAT TTGCAGGGGC CTTACTCGGC ACGTTATTTA
ACCATGGCCG ATCTTTTTCT GGATTTTAAC CTGAAGGATT CTATACCTAC CGCTTATCAC
CGTGAACTGG ACATTGACAA TGCCATAAGT ACAGTGACCT ATACCGTTGG GGGCATTACC
TATAAAAGGG AAAGCCTGAT CAGTTATCCG GATAAGGCCG TGGTGATCCG CATCACGACA
GATCAAAAAA ATGCGCTTAA TTTTAGCACC AGCATAAGCA GTAAACTGAA ATATACAGCA
AGGGCTGTTG GGGCGGATTT GCTGGTGTTG AAAGGCAAAG CGCCTAAACA CGTGGCACAC
CGGGCTACCG AAGCGGCACA GGTTGTGTAT GATGATAAGG AAGGGATGAC CTTTGAGGTG
GATGTGCGGA TTAAGGCAGA AGGGGGTACA ACAACAGCAA AAGGAACGGA GATCCTGGTG
AGCAAAGCCA ATGCGGTAAC CATTTATTTA AGTGGGGCCA CCAGTTTTAA CGGCTACAAT
AAATCGCCCG GGCTGGAGGG TAAAAATCCG GCAACTGAAG CTGCAGGTAT CCTGAAAAAA
GTTTATCCTA AGCCATACAG TACAATTAAA ACTGCGCATG TTGCAGATTA TAAGGCTTTG
TTTGACCGGG TTTCATTTAG TTTGGGCAGC AATGCAGAAC TGGAGGGGCT GCCAACCAAT
GTAAGGTTAT CCAGGCAGGG GGCCATGGGA AACGACCAGG GCCTGCAGGT TTTGTATTAC
CAGTTTGGCC GTTACCTGAT GATCGCCAGT TCCAGACCGG GATCGCAGGC TACCAATTTA
CAGGGGATCT GGAACGATCA TGTACAGCCA CCCTGGGGGA GCAATTATAC CGTAAATGCA
AATACCCAGA TGAATTACTG GCTTGCAGAA CAGACCAATT TGTCGGAACT GCACCAACCA
TTGTTTGATT TTATAGGCCG TATGGCTGTG AACGGGGCTA AAACTGCGAA AATTAATTAT
GACATCAGAC AGGGCTGGGT GGTACACCAC AATACCGATA TCTGGGCCAA GAGTTCTCCT
ACAGGGGGCT ACGACTGGGA CCCTAAAGGC GCGCCACGCT GGTCGGCCTG GCCTATGGGC
GGGGCCTGGC TAACTACACA CCTGTATGAT CATTACCTGT TTACGGGCGA CAAACAGTTT
CTGAAAGAAA AGGGCTATCC TTTGATGAAA GGTGCTGCTG AGTTTATGCT GAAATGGCTG
GTTAAAGATG ATAAAACTGA GTATCTGGTC ACCAATCCAT CTACCTCTCC GGAAAATATA
TTTAAAATTG AGGGAAAAGA GTATGAAGTA AGTAAAGCCA CAACCATGGA CATGGGCATC
ATTAAGGAGC TGTTTACAGA TTGTATCGCA GCCTCAAAAA TATTGGATAT GGATGCTGAT
TTCCGGGTTG AGCTGGAAAA AGCCAAAGCA AAGCTCTATC CGTTTAATAT AGGCCGTTAC
GGACAATTAC AGGAATGGTT CAATGATGTG GATGATCCTA AGGACAGCCA CAGGCATTTA
TCGCATTTAT TTGCCCTTTA TCCGGGTAAC CAGATCACGG TATACCATAC ACCTGAACTG
GCTGCTGCGG CAAAACAATC GCTGCTGCAC CGTGGCGACC TGAGCACCGG ATGGTCTATG
GCCTGGAAAA TTAACTGGTG GGCCAGGTTA CAGGATGGGA ACCATGCTTT AAAGATATTG
AAAGCAGGTT TAACGTTGAT TGACCCGGCC AAAACAACAG AACCACAAAA AGGGCCCAGT
GCCAGCATGG CACAGCTTAC AAATGTGCAG ATGAGTGGGG GCGGAACTTA TCCGAACCTT
TTTGATGCCC ATCCGCCTTT CCAGATTGAT GGTAACTTTG GGGCCACTGC GGGCATGACT
GAAATGTTAT TGCAAAGCAA TACCGATGAA CTGAGTTTAT TGCCTGCTTT GCCGGATGAC
TGGGAAAAAG GAAGTATCAA AGGCATCAAA GCCCGTGGTA ATTTCAGGGT AGACATAAGC
TGGGCCGAGG GCAAACTGAG CAAGGCGCTG ATCTATTCAG GAAGCGGTGG AAACTGCAGG
CTCAGGACCA CTGTGCCGGT AAAGGTAAGT GCTGTGGTTG CCAGACCGGC AAAGGGGCCA
AACCCAAACC TGCTGAATGT ATTGCCCGAA AAACCTGAAT ACCATAAAAG TGAAAATGCC
AAGCTGCAGG TACTGGATCT GAAAAAGAGC TATGTGATTG ATTTTGAAAC AGAAAAAGGA
AAAACTTATA CCATAAACGT ACTATAA
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| Protein sequence | MRRYSILPVL AIFCISSDAI AQEQKGTALK LWYTQPAKVW EEALPLGNGK TGAMVFGRVN
KERFQLNDNT LWSGSPEAGN NPKGPANLPL VRQAVFEGDY ARAAALWKKN LQGPYSARYL
TMADLFLDFN LKDSIPTAYH RELDIDNAIS TVTYTVGGIT YKRESLISYP DKAVVIRITT
DQKNALNFST SISSKLKYTA RAVGADLLVL KGKAPKHVAH RATEAAQVVY DDKEGMTFEV
DVRIKAEGGT TTAKGTEILV SKANAVTIYL SGATSFNGYN KSPGLEGKNP ATEAAGILKK
VYPKPYSTIK TAHVADYKAL FDRVSFSLGS NAELEGLPTN VRLSRQGAMG NDQGLQVLYY
QFGRYLMIAS SRPGSQATNL QGIWNDHVQP PWGSNYTVNA NTQMNYWLAE QTNLSELHQP
LFDFIGRMAV NGAKTAKINY DIRQGWVVHH NTDIWAKSSP TGGYDWDPKG APRWSAWPMG
GAWLTTHLYD HYLFTGDKQF LKEKGYPLMK GAAEFMLKWL VKDDKTEYLV TNPSTSPENI
FKIEGKEYEV SKATTMDMGI IKELFTDCIA ASKILDMDAD FRVELEKAKA KLYPFNIGRY
GQLQEWFNDV DDPKDSHRHL SHLFALYPGN QITVYHTPEL AAAAKQSLLH RGDLSTGWSM
AWKINWWARL QDGNHALKIL KAGLTLIDPA KTTEPQKGPS ASMAQLTNVQ MSGGGTYPNL
FDAHPPFQID GNFGATAGMT EMLLQSNTDE LSLLPALPDD WEKGSIKGIK ARGNFRVDIS
WAEGKLSKAL IYSGSGGNCR LRTTVPVKVS AVVARPAKGP NPNLLNVLPE KPEYHKSENA
KLQVLDLKKS YVIDFETEKG KTYTINVL
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