Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2694 |
Symbol | |
ID | 8253802 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3159218 |
End bp | 3160369 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936342 |
Product | glycosyl hydrolase family 88 |
Protein accession | YP_003092957 |
Protein GI | 255532585 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000585774 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00821463 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTTTTG CCGTTCCGGC TTTTGCACAA AAGGTTGATG TACAAAAAGC ATTTAAACAG GCGGATGCAC AGACGATGCT TATGCTGAAG GAAATTGAAA AGGTTAAAGC TACAACTAAA AACGATCAGG TTTCGCCGAG AACCCTGGAG AAGGGTAATT TAAAACTGGT AGCCTCGCGC GACTGGACCA GTGGCTTTTT TCCGGGTGAA CTTTGGTTTT TGTATGAATA TACAGGTAAG CAAACCTGGA AGGACCAGGC CAGGGCTTTT ACGGCAGCTA TAGAACAGGA ACAGTTTAAT GGCAAAACGC ATGATATGGG CTTTAAGGTA TATTGCAGTG TAGGTACGGG GTACCGTTTA ACAAAAGATG AACACTACAA AACGGTGATC ATACAGTCGG CCAAAACCCT TGCAACCCGT TTTAACCCTA AAACAGGCGT GATCCGCTCA TGGGACCACA GTACAGATAA ATGGGTAAAC CCGGTGATCA TTGACAATAT GATGAACCTG GAACTGCTTT TTGAAGCCAC GAGGCTGACT GGTGATTCTT CATTCTATAA AATTGCAGTG AGCCATGCCA ATACAACGAT GAAGAACCAT TTTCGTGCCG ACTACAGTTC TTATCATGTA ATCGATTATG ATCCGAATAC AGGTGCGGTA CTGAAAAAGA ATACCCATCA GGGCTATAGC CATGAATCGG CCTGGGCCAG GGGCCAGGCA TGGGCCTTAT ATGGTTATAC CATGTGCTAT CGTTATACAA AAGACCCTGC CTATCTGAAA CAGGCAGAGG GTGTTGCCGC TTTTATCCTT AACCACCCCA ATATGCCTGC AGATCTGGTG CCTTACTGGG ATTTTAATGC ACCTGAAATT CCTAAAGAGC CACGTGACGC TTCTGCTGCT GCGGTAATTG CTTCTGGTTT ATATGAACTG AGTGGTTACA GTACGCGTAA AAATCTTTAC CTGCAAAAGG CGGATAAGAT GCTGAACAGC CTGAGTACAA AATATATTTC ACCTGCTGGC GAAAACAAAG GTTTTATCCT TGTACAAAGT ACAGGATCCA AACCATCTGA CAGCGAGGTA AATGTGCCGC TTTCTTATGC AGATTATTAT TACCTGGAAG CTTTGTTGCG GTACAAAGCA ATAAAAAGAT AG
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Protein sequence | MLFAVPAFAQ KVDVQKAFKQ ADAQTMLMLK EIEKVKATTK NDQVSPRTLE KGNLKLVASR DWTSGFFPGE LWFLYEYTGK QTWKDQARAF TAAIEQEQFN GKTHDMGFKV YCSVGTGYRL TKDEHYKTVI IQSAKTLATR FNPKTGVIRS WDHSTDKWVN PVIIDNMMNL ELLFEATRLT GDSSFYKIAV SHANTTMKNH FRADYSSYHV IDYDPNTGAV LKKNTHQGYS HESAWARGQA WALYGYTMCY RYTKDPAYLK QAEGVAAFIL NHPNMPADLV PYWDFNAPEI PKEPRDASAA AVIASGLYEL SGYSTRKNLY LQKADKMLNS LSTKYISPAG ENKGFILVQS TGSKPSDSEV NVPLSYADYY YLEALLRYKA IKR
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