Gene Phep_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2685 
Symbol 
ID8253793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3149093 
End bp3149533 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content44% 
IMG OID644936333 
Productferric uptake regulator family protein 
Protein accessionYP_003092948 
Protein GI255532576 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0992523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACA TTATGGTAAC AGAAATAGAA AACAGGCTCA AAGCAAGAAA GATCAACCCA 
ACAGCCATGC GATTACTGGT ATTGGAGTTT TTAATCAGAC AAACTGCTGC CATCAGTTTA
AATGACCTGG AAAAAGCCAT GGCCCCTTCA GACAGGATCA CACTATACCG TACCTTAAAA
ACCTTCGAAG AAAAAGGCCT CGTCCATAGT ATAGAAGACG GTACAGGGGC CACCAAATAT
GCACTTTGCG AAAAAGATTG TGATGGCGAA AGCCATCACG ATCTTCACGT TCATTTTTAC
TGCAGTACCT GCAGGGAAAC CTTTTGCCTG CCCGACACCC GTATCCCTGA AATGAACCTG
CCCAATGGTT TTGAAAAAGA GGAAATGAAC CTGATCATTA AAGGAATGTG CGAACGTTGT
AACACGCCCA CTTTGCAATA G
 
Protein sequence
MSHIMVTEIE NRLKARKINP TAMRLLVLEF LIRQTAAISL NDLEKAMAPS DRITLYRTLK 
TFEEKGLVHS IEDGTGATKY ALCEKDCDGE SHHDLHVHFY CSTCRETFCL PDTRIPEMNL
PNGFEKEEMN LIIKGMCERC NTPTLQ