Gene Phep_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2680 
Symbol 
ID8253788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3139673 
End bp3141457 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content42% 
IMG OID644936328 
ProductCytochrome-c peroxidase 
Protein accessionYP_003092943 
Protein GI255532571 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.714697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA TCAAACAAAC CATAGCATTT GTATTTATTT TAACCACTAC TACGCTCCTC 
TCTATCTTTT GCACGCAAAA ACAGCCAGCA GCAGAACTGG TAAAAACCCG TTTTAATAAA
GAACTGACCT TGCTTCAAAC CATCGTAAAC AAAGATCTTT TTACTGCAGT ACAGCAGAAA
AATAAGAAAA AAATAAAAAA AGCCTTTATC GCGGCAAGGG CACAATATAA AAAAATAGAA
TATTATGTAG CGTATTTTTT CCCTTCCACC TCTGAAATGA TCAATGGAGC TCCCATCGAT
GAAATAGAAT TGGGTGAAAA CCTGATAGAA AAGCCTACAG GCTTCCAGGT AATGGAAGAG
CTGATCTATG AAACACCGAC AACTGAAAAC CGGGACGAGC TGCTCAACCA GGTCAGGAAA
ATGCAGCTGA ACTTAAAGCG TATGGACCGG TACAACCAGC AATATGAAAT TACAGATGCA
CAAATATTCG ATGCCATCAG ACTCGAGATT TTCCGCATCA CCAGTCTGGG GATTACAGGC
TTCGACAGCC CTGCAGCCTT GCAATCTTTG CCCGAAGCAG CAGCAGCGCT TATTGGCATT
ACAAATGCAT TAAACACATA CGGAGCAAAT GATGACCTGG ATAAAGCACT TAAAACTGCA
ATTGCACAAC TAAGTACTGC AAAAGATTTT AACGACTTTA ACAGGCTTGA CTTTATAACG
TTACACCTGC AACCCATCAG CATCAAAGCA GATCAGCTAC GTCAGGAATT GAAGATCAAT
ACCGCAGCCA GCGGCTCTGC CCTGCAGGAT GATGCGGTAA GTATGTTTCA AAAGAATGCC
TTTAATCTCA ATAAATTTGT TGGCAACTAT ACGGAATACA TAACTAAAGA CAAGACCACC
CTGGGGAAAT TGCTGTTCAA CAGTAACATT TTATCCAGGG CCGGAAACCG CAGCTGCGCC
AGCTGTCATC ATGAGGCTAA AGCATTTACT GACGGACTTG TAACTGCTAA GGGATTAAAA
GGAACACTTT TACGAAATAC CCCGACTTTA ATTTATGCTG GACTGCAGCG TGGTTTTTTT
TACGATCTTA AAGCAGGTTC CCTGGAAGAC CAGGCCCTGG ATGTTGTACA CCATAAAAAC
GAAATGGACG GTTCATTAAC AGCAGCGGCC AAAAAAATTA ATCAGGACAA AATGTACGCA
ACATCATTTG CAAAAGCCTT TAACGACAAA ACTGGTAAAG CCAACCCATG GCGCATCCAG
CATGCACTGG CCACCTATAT CCGCTCCCTT TCTCCTTTTT CATCTAAACT GGACAAATAT
ATGCAGGGGG ATAAAACCCA GCTAAATGTG CAGGAAAAAT CCGGGTTTAA CTTGTTTATG
GGAAAAGGTA AGTGCGGAAC CTGCCACTTT GCGCCCTTAT TTAATGGTAC TCAGGCCCCA
TTGTTTCAGA AAAGTGAAGC GGAAGTATTG GGCGTACCGG CGCATCCTGA TACAGCTAAT
GCTAAAATTG ACAAAGATGA GGGCCGTTTT ACACTTAATC CTTATCCTCA ATATAAATAT
GCCTTTAAAA CTACTACACT GCGTAACCTT TCAAAAACAG CGCCTTATAT GCACAACGGG
GTGTACAAAA CACTTGAAGA GGTTTTAAAT TTTTACAATC GTGGTGGAGG TGCCGGTATT
GGGATTGCGC TAGACAACCA GACCCTGCAG GCAGAGCCTT TAAACCTTAG CCCCAAAGAA
ATACAGGACA TCATTGCATT TTTAAACACA ATGGATGATC AATAA
 
Protein sequence
MTGIKQTIAF VFILTTTTLL SIFCTQKQPA AELVKTRFNK ELTLLQTIVN KDLFTAVQQK 
NKKKIKKAFI AARAQYKKIE YYVAYFFPST SEMINGAPID EIELGENLIE KPTGFQVMEE
LIYETPTTEN RDELLNQVRK MQLNLKRMDR YNQQYEITDA QIFDAIRLEI FRITSLGITG
FDSPAALQSL PEAAAALIGI TNALNTYGAN DDLDKALKTA IAQLSTAKDF NDFNRLDFIT
LHLQPISIKA DQLRQELKIN TAASGSALQD DAVSMFQKNA FNLNKFVGNY TEYITKDKTT
LGKLLFNSNI LSRAGNRSCA SCHHEAKAFT DGLVTAKGLK GTLLRNTPTL IYAGLQRGFF
YDLKAGSLED QALDVVHHKN EMDGSLTAAA KKINQDKMYA TSFAKAFNDK TGKANPWRIQ
HALATYIRSL SPFSSKLDKY MQGDKTQLNV QEKSGFNLFM GKGKCGTCHF APLFNGTQAP
LFQKSEAEVL GVPAHPDTAN AKIDKDEGRF TLNPYPQYKY AFKTTTLRNL SKTAPYMHNG
VYKTLEEVLN FYNRGGGAGI GIALDNQTLQ AEPLNLSPKE IQDIIAFLNT MDDQ