Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2680 |
Symbol | |
ID | 8253788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3139673 |
End bp | 3141457 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936328 |
Product | Cytochrome-c peroxidase |
Protein accession | YP_003092943 |
Protein GI | 255532571 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.714697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCA TCAAACAAAC CATAGCATTT GTATTTATTT TAACCACTAC TACGCTCCTC TCTATCTTTT GCACGCAAAA ACAGCCAGCA GCAGAACTGG TAAAAACCCG TTTTAATAAA GAACTGACCT TGCTTCAAAC CATCGTAAAC AAAGATCTTT TTACTGCAGT ACAGCAGAAA AATAAGAAAA AAATAAAAAA AGCCTTTATC GCGGCAAGGG CACAATATAA AAAAATAGAA TATTATGTAG CGTATTTTTT CCCTTCCACC TCTGAAATGA TCAATGGAGC TCCCATCGAT GAAATAGAAT TGGGTGAAAA CCTGATAGAA AAGCCTACAG GCTTCCAGGT AATGGAAGAG CTGATCTATG AAACACCGAC AACTGAAAAC CGGGACGAGC TGCTCAACCA GGTCAGGAAA ATGCAGCTGA ACTTAAAGCG TATGGACCGG TACAACCAGC AATATGAAAT TACAGATGCA CAAATATTCG ATGCCATCAG ACTCGAGATT TTCCGCATCA CCAGTCTGGG GATTACAGGC TTCGACAGCC CTGCAGCCTT GCAATCTTTG CCCGAAGCAG CAGCAGCGCT TATTGGCATT ACAAATGCAT TAAACACATA CGGAGCAAAT GATGACCTGG ATAAAGCACT TAAAACTGCA ATTGCACAAC TAAGTACTGC AAAAGATTTT AACGACTTTA ACAGGCTTGA CTTTATAACG TTACACCTGC AACCCATCAG CATCAAAGCA GATCAGCTAC GTCAGGAATT GAAGATCAAT ACCGCAGCCA GCGGCTCTGC CCTGCAGGAT GATGCGGTAA GTATGTTTCA AAAGAATGCC TTTAATCTCA ATAAATTTGT TGGCAACTAT ACGGAATACA TAACTAAAGA CAAGACCACC CTGGGGAAAT TGCTGTTCAA CAGTAACATT TTATCCAGGG CCGGAAACCG CAGCTGCGCC AGCTGTCATC ATGAGGCTAA AGCATTTACT GACGGACTTG TAACTGCTAA GGGATTAAAA GGAACACTTT TACGAAATAC CCCGACTTTA ATTTATGCTG GACTGCAGCG TGGTTTTTTT TACGATCTTA AAGCAGGTTC CCTGGAAGAC CAGGCCCTGG ATGTTGTACA CCATAAAAAC GAAATGGACG GTTCATTAAC AGCAGCGGCC AAAAAAATTA ATCAGGACAA AATGTACGCA ACATCATTTG CAAAAGCCTT TAACGACAAA ACTGGTAAAG CCAACCCATG GCGCATCCAG CATGCACTGG CCACCTATAT CCGCTCCCTT TCTCCTTTTT CATCTAAACT GGACAAATAT ATGCAGGGGG ATAAAACCCA GCTAAATGTG CAGGAAAAAT CCGGGTTTAA CTTGTTTATG GGAAAAGGTA AGTGCGGAAC CTGCCACTTT GCGCCCTTAT TTAATGGTAC TCAGGCCCCA TTGTTTCAGA AAAGTGAAGC GGAAGTATTG GGCGTACCGG CGCATCCTGA TACAGCTAAT GCTAAAATTG ACAAAGATGA GGGCCGTTTT ACACTTAATC CTTATCCTCA ATATAAATAT GCCTTTAAAA CTACTACACT GCGTAACCTT TCAAAAACAG CGCCTTATAT GCACAACGGG GTGTACAAAA CACTTGAAGA GGTTTTAAAT TTTTACAATC GTGGTGGAGG TGCCGGTATT GGGATTGCGC TAGACAACCA GACCCTGCAG GCAGAGCCTT TAAACCTTAG CCCCAAAGAA ATACAGGACA TCATTGCATT TTTAAACACA ATGGATGATC AATAA
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Protein sequence | MTGIKQTIAF VFILTTTTLL SIFCTQKQPA AELVKTRFNK ELTLLQTIVN KDLFTAVQQK NKKKIKKAFI AARAQYKKIE YYVAYFFPST SEMINGAPID EIELGENLIE KPTGFQVMEE LIYETPTTEN RDELLNQVRK MQLNLKRMDR YNQQYEITDA QIFDAIRLEI FRITSLGITG FDSPAALQSL PEAAAALIGI TNALNTYGAN DDLDKALKTA IAQLSTAKDF NDFNRLDFIT LHLQPISIKA DQLRQELKIN TAASGSALQD DAVSMFQKNA FNLNKFVGNY TEYITKDKTT LGKLLFNSNI LSRAGNRSCA SCHHEAKAFT DGLVTAKGLK GTLLRNTPTL IYAGLQRGFF YDLKAGSLED QALDVVHHKN EMDGSLTAAA KKINQDKMYA TSFAKAFNDK TGKANPWRIQ HALATYIRSL SPFSSKLDKY MQGDKTQLNV QEKSGFNLFM GKGKCGTCHF APLFNGTQAP LFQKSEAEVL GVPAHPDTAN AKIDKDEGRF TLNPYPQYKY AFKTTTLRNL SKTAPYMHNG VYKTLEEVLN FYNRGGGAGI GIALDNQTLQ AEPLNLSPKE IQDIIAFLNT MDDQ
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