| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2645 |
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| Symbol | |
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| ID | 8253752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3085585 |
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| End bp | 3089016 |
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| Gene Length | 3432 bp |
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| Protein Length | 1143 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936292 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092908 |
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| Protein GI | 255532536 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTAA CCACCGTACT GTTAATGGCA TCTATGCTTC AGGTAAACGC ATCTGGATTT
GCACAAAAGA TCAATCTCAG TAAAACCAAC GTCCCGTTGA AAACAATCAT CAAACACCTG
AGGTTGCAAT CAGGTTATGA CTTTGTTTAC AATAATAAAA TTCTTGCCCA TACCAAGCCC
CTGAGTGTCA ATTTCGAAAA CATTGGGTTT ATTGAAGCCT TAGATCAGGT TTTCGGGTCG
CAGTCTTTGA CTTATACGCT TGAAGATAAA ATCGTTGTTG TAAGACTGAA ACAACCTGCC
GCTATTGTTA GATCGTCAGA TACCTTTTCA TCTATAAATA TTAGAGGTAA GGTTGTTGAC
GATAACGGCA AGCCACTTCC GGGGATAACT GTTAAGGTAA AAGGAACCAA CACCGGTACA
ATTACTGACG GGATAGGGGA GTTTGTAATC AATGTTACCG AAAAAAATAG CATCCTGATA
TTCTCTGCCA CAGGATTTAA GATTAAAGAA GTTGAAACAG CAGGAAAAAA TTCCATTAAC
GTGGTTATGT TTGAAGATAT TTCGGTATTA AGCCAGGTTG TGATCACAGG TTACGGGGCT
CAATCAAGGG AAACCTTAAC AACTTCGATT TCCAAACTCG ATGACCGGGT TTTAGAAAAT
GTGCCATACG CTAACGCGAC GTCTGCATTA CAGGGAAATA TAGCCGGACT GACGGTCAAG
ACATCATCCG GACAGCCAGG GGCAAGTCCT AAAGTTGTGC TGCGGGGCGG GATTTCCATA
GCAAATCCTG ATGGGGCCAA TCCCCTGTAC AGTATTGACG GTGTGATAAG GGACAATATG
AACGATATCA ATCCTGAAGA CATAGCATCC ATTCAGGTTT TAAAAGACGC TGCCGCAACA
TCCATTTATG GCGCACGCGG TTCAAATGGG GTAATTCTTG TTACGACCAA ATCAGGAAAA
GCAGGAGCGT CAAAAATCTC CTATAGCTAT GACCTCACAT CGTCCCACCT TATCCGGGAC
TACGAATTTT TGAATGCAAG GGACTATATC TATTTTGCCC GCCTCGGAAT TCTTGCCACA
GCTAGAAAAA TACCTGCAAG GGTAAGTCTT TTATCGGTCG CCGGCAGTGG GGGTACAGGG
AATGATCTGA CCAACAGCAC ATTGTATACT ACTCAATACC TTACAGCTCA GAACCAGCAT
AAACTGAGCG AAGGCTGGGA GTCTATGGTT GACCCGGTAG ATCCGTCGAA AACCATTATT
TTTAAGGACA CCGATTTTCA GGAAGCGCTC TACCGTACCG GCATTGCCCA CAATCACTAC
ATTACTGCTT CAGGGGGAAC GGACAAGGCT ACTTTCAATG CAGGTCTGGG CTATAACAGT
ACTGACGGGA TTGCGATAAC AACAAAATTC AGACGGCTTT CTGTAAATAT GAACGGCAAC
CTTCAGCTCA AGGACAATGT ATCAGTTTTT GGAAGATTGT TGTATACAAA TACGGGCAAC
AATGCAGTAA ACAGCGAATC CATACAGTTT GGAAGAAATA CTTTATTGCC AAGAACGGCC
AAGTTTATAT TTGAAGATGG CTCCATCGCC CCCGGACGGT CTGAAGACCT TGCTAACCCG
GTATACCAGT TAGGGACCTT CGTCAATAAA AATGCACAAA ATTTTACTAC AATAGTACTT
GGATCGAAAT GGGCGATATT GCCGGGGTTG GTTTTTGAAC CCCAAGTTTC TTATTATAAC
ATTCAAAATG ATGCACGTTC ATTCAGAAAG GCCTTTCTGG CGGGAGTGAA CCTGAATACC
ACAAGAAGTA CCACAGGCGA TTACGCCAAA CAAACACAAA CACAGGCAGA TGCAGTCCTG
ACGTATAATA AATCATTCAA AAACCTGCAT AATTTTGAGA TAAAGGGTGG GTTTTCTTTT
TTTGGTAAGG AAACTGCAAC GATTGGAGCT ACAGGCCAGG GCGCTTCGAC TGATGTTGTG
CCAACATTGA ATTCTGCCGC TATAGCAACC GCGGTCAGGG GGCAGGAGGC CGAACAGGTC
ATTATCGGAT ATTTTTCAAG AGTAAATTAT AATTACAATT CAAAATATTT ACTTTCTTTC
AATGCCCGGT ATGACGGAGC TTCAAACCTG GGGGACAATT ACAAATTCGG GTTTTTCCCC
GGTGTGTCTC TGGGCTGGAA TGTACATAAA GAAAACTTCT GGACGTCGGT TCCTGCTGCA
ATATCCAGTT TAAAGCTCAG GAGCAGTTAT GGTGTCAATG GCAATATAAA CGGGTTGGGG
TTATACCAGG CCCAGGGCCA ATACAGTGTA GGGCTACAAT ACGGCGGACT GGCAGGAATC
CAGAATTCAA CCATCGCTAA CAATGAACTG AAATGGGAAC AATCTAAAAC TTTAGATGTC
GGACTGGATC TTGGCTTGTT AAATAACCGC ATTAGCTTGC TGTTTGATTA TTACATAAGA
AGAACGGACA ATTTGCTGAC CAGCTTCTCC CTGCCGCAAT CAACTGGTTT TCAGAGCGTC
TTAACAAATC TTGGCAGTTT GCAAAACAGA GGTTTCGAAC TGGAGCTTAC GGCCAGTCCG
CTGCCTGTAG ATGCAGCATT TCAATGGAGC GTTTCTTTTA ATGCGGCCAA AGTCAAAAAT
AAAATTTTAA AGCTTCCAGA CAATGGCGTG GAAAATAACA GGATTGGAGG ATTTTATGTC
TACGATCCAG CCAGGCAAGA CTACGCCTGG CTGGGAGGAC TCCAGGAGGG CGGTAGAATT
GGTGATTATT ATGCTTATAA ACAAGCCAGC ATTTACAGAA CTGATGCCGA GGCTGCTGCG
GGTCCCGTGG ATATGCTCGT TGTCGGAACT GATAAAACCA AGTACGGAGG GGATGTAAAC
TGGGAGGATG TTGACGGAAA CGGGATTATT GATGAAAGGG ACAGGGTATA TCTGGGCAAT
CAGTTTCCAA CCTTAACAGG TGGATTTTCC AATTATTTTA CTTATAAAAA CATCAGCCTT
TCCGTGCGAA TGGATTATAC TGCCGGCCAT ACCATAGTTA ACGGGGTGCG GCTGTTTGGT
ATACAACAGG CTTCGGGCGA CAACGGTTTA TCGATTGATG TACTCCGGTC ATGGCAGAAT
CCTGGAGATG TCACAGATAT CCCTAAATAT TATTATGCCG ACCAGCAGGC ACAACGTAAC
GTAGAAAGAG GGAATTCACA ATTCTATGAG AAAGGTGACT ATATTGCACT TAGAGAGGTA
ACCTTATCTT ATAGCTTACC CCAGTCGGTT CTGCGGAAAA TTAAATTAAA CAATCTCAGG
TTTAATATTA CCGGGAATAA TCTACATTAT TTTACGAAGT TCAAAGGTAT GATCCCTGAA
GATGGGGGGT TGGATGTCGG GCGGTATCCT GTGGCCAGAA ATTTCATATT CGGTGTAAAT
ATTTCTATTT AA
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| Protein sequence | MRLTTVLLMA SMLQVNASGF AQKINLSKTN VPLKTIIKHL RLQSGYDFVY NNKILAHTKP
LSVNFENIGF IEALDQVFGS QSLTYTLEDK IVVVRLKQPA AIVRSSDTFS SINIRGKVVD
DNGKPLPGIT VKVKGTNTGT ITDGIGEFVI NVTEKNSILI FSATGFKIKE VETAGKNSIN
VVMFEDISVL SQVVITGYGA QSRETLTTSI SKLDDRVLEN VPYANATSAL QGNIAGLTVK
TSSGQPGASP KVVLRGGISI ANPDGANPLY SIDGVIRDNM NDINPEDIAS IQVLKDAAAT
SIYGARGSNG VILVTTKSGK AGASKISYSY DLTSSHLIRD YEFLNARDYI YFARLGILAT
ARKIPARVSL LSVAGSGGTG NDLTNSTLYT TQYLTAQNQH KLSEGWESMV DPVDPSKTII
FKDTDFQEAL YRTGIAHNHY ITASGGTDKA TFNAGLGYNS TDGIAITTKF RRLSVNMNGN
LQLKDNVSVF GRLLYTNTGN NAVNSESIQF GRNTLLPRTA KFIFEDGSIA PGRSEDLANP
VYQLGTFVNK NAQNFTTIVL GSKWAILPGL VFEPQVSYYN IQNDARSFRK AFLAGVNLNT
TRSTTGDYAK QTQTQADAVL TYNKSFKNLH NFEIKGGFSF FGKETATIGA TGQGASTDVV
PTLNSAAIAT AVRGQEAEQV IIGYFSRVNY NYNSKYLLSF NARYDGASNL GDNYKFGFFP
GVSLGWNVHK ENFWTSVPAA ISSLKLRSSY GVNGNINGLG LYQAQGQYSV GLQYGGLAGI
QNSTIANNEL KWEQSKTLDV GLDLGLLNNR ISLLFDYYIR RTDNLLTSFS LPQSTGFQSV
LTNLGSLQNR GFELELTASP LPVDAAFQWS VSFNAAKVKN KILKLPDNGV ENNRIGGFYV
YDPARQDYAW LGGLQEGGRI GDYYAYKQAS IYRTDAEAAA GPVDMLVVGT DKTKYGGDVN
WEDVDGNGII DERDRVYLGN QFPTLTGGFS NYFTYKNISL SVRMDYTAGH TIVNGVRLFG
IQQASGDNGL SIDVLRSWQN PGDVTDIPKY YYADQQAQRN VERGNSQFYE KGDYIALREV
TLSYSLPQSV LRKIKLNNLR FNITGNNLHY FTKFKGMIPE DGGLDVGRYP VARNFIFGVN
ISI
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