Gene Phep_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2598 
Symbol 
ID8253705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3036875 
End bp3038137 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content41% 
IMG OID644936248 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003092864 
Protein GI255532492 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.403237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.200679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGAT ACAGTGCCCG GAACAACTTA AGCCTCAGGT CTTTTAACTG GGAATTGATT 
GTATTGCTTT GGCTGGTTTT TTTCTTTAAC CAGGCCGACC GTCAGATATT TAACGTGATA
TTACCTCAGA TTAAAGCAGC ACTGAAGTTA ACGGATGCAG AATTGGGGAT GATTGCATCG
GTATTTATCT GGGCTATAGG ACTATGTGTC CCTTTAAGTG GTTATATCGG TGATGTTTTC
AGTAAGAAAA AAGTAATCAT TTTTAGCCTG TTGTTGTGGA GCACCGCAAC CTTTTTTACC
GGCCTTAGCG CAGGCCTGGT ACACCTGATC GTTTTAAGGG CAGTAGTAGG GAGCAGTGAA
TCTTTTTACG CCCCTGCAGC AAATGCGCTT ATAGCAGAAA AATATCAGGA AAAAACTGGC
CTGGCTATGG CCATACACCA AACTGCGTTA TATGCCGGGA TAATCATCAG CGGATTATCT
GGTGCATTGA TAGCCGAAAG ATTTGGCTGG AGCACCGCCT TTTATTTTTT TGGTGGGATA
GGAATCATAC TTTCCATCGT GCTGTTTGTC AGGTTTAAAA AAATTATTGC ACCGGATACG
GTACAGACAA CCTATAAAGT AACATTATTT GACGGCATCA TGGGACTGTT CAGGAAAAAG
ACAGCGATAT TACTTACGCT TGCCTTTGCC TGTATGGTAT TTGTAAATGT AGGCTATTTA
ACCTGGTCTC CTACTTTCTT ACATGAAAAG TTTAATCTCT CACTAGCAAA TGCTGGTTTT
TCTTCCATGT TTTACCATCA TATTTTCGCT TTCCTTGGCG TATTGCTCGG AGGACGTTTT
TCCGATCAGC TGGTTAAAAA AACTGCAGGT TCGAGACTCA AACTACAAGC TTTAGGCCTG
TTACTAGCTT GTCCTTTTAT TTATTTAATG GGCTCGGCAA ATCAGCTGTT TTGGGTATAT
GCGGGGATGG GCTTATTTGG CTTTTTCAGG GGGATTTATG ATTCTAATAT TTATGCTTCT
TTATTTCTGG TCATCCCCCC TACCATACGG GCCTCTGTTT CAGGGGCCAT GATTATGTTT
GCTTTTTTGA TAGGTGCCTT TGCACCATGG ATTTTAGGCA TTGTAAAACC TACATTAGGG
TTATCTGATG GGTTATCGGC CCTTTCCATA GTATATCTGG CTGGCAGTAT CTTTATATTT
ATAGCGCTGA AATTTACTTT ATCCAAAGAA TTATATATTG CTGCACAGAC CGATAAAATT
TAA
 
Protein sequence
MIRYSARNNL SLRSFNWELI VLLWLVFFFN QADRQIFNVI LPQIKAALKL TDAELGMIAS 
VFIWAIGLCV PLSGYIGDVF SKKKVIIFSL LLWSTATFFT GLSAGLVHLI VLRAVVGSSE
SFYAPAANAL IAEKYQEKTG LAMAIHQTAL YAGIIISGLS GALIAERFGW STAFYFFGGI
GIILSIVLFV RFKKIIAPDT VQTTYKVTLF DGIMGLFRKK TAILLTLAFA CMVFVNVGYL
TWSPTFLHEK FNLSLANAGF SSMFYHHIFA FLGVLLGGRF SDQLVKKTAG SRLKLQALGL
LLACPFIYLM GSANQLFWVY AGMGLFGFFR GIYDSNIYAS LFLVIPPTIR ASVSGAMIMF
AFLIGAFAPW ILGIVKPTLG LSDGLSALSI VYLAGSIFIF IALKFTLSKE LYIAAQTDKI