| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2591 |
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| Symbol | |
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| ID | 8253698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3019857 |
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| End bp | 3020684 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936241 |
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| Product | TonB family protein |
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| Protein accession | YP_003092857 |
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| Protein GI | 255532485 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0507337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.083991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGTT CTAAAATCGA TTTATTTGGC AATGAATGGC TGGACGTAGT ATTTGATCAG
AAAAACAAAA GCTACGGAGC CTATGCGCTC AGGAGACAAA GTTCATCAGA TACGGCTAAA
GCGCTTTTTA TCGCAGGATC ACTGTTTGTC CTGTTTTTCT TATCTCCTAA GATCATTAAG
TTGATCAAAG GGAATGAAAC GATCGAGGTG TTGCCGGAAA GAAAAACGGA GGTTATAGTT
CAACCACCAC CAGCTATTGA TCCTGAAACA CTACCACCAG CAGCAATTGA GCCGCCTCCG
GCAAAGCAGG ACCAGGTTAA GTTTCTTCCG CCTAAAGTTA TTCAGGACGA CCTGGTAAAA
GATGTAGACC CTGTTCAGAT CAGTGATTTA AAAGAAGCCA CTCCAGGACC GAAAAATGTT
ATTGGTGAAC CAGACGGTGT AATAGTTATA GAAGGGCCAA CCGGGAAAGG ACCCAAAGGA
GCCGTGGCAA CAGAGGACAA TACAGTATAT GATGTATTTA ATGCACTAGA GGTACAGCCT
GTTTTTCCTG GTGGAATGGA AAAGTTCTAT GCTTACCTTT CGAAATCTAT CAGATACCCT
GCTGCTGCCC AGGAAATTAA TCTGCAAGGC AAAGTATTCC TGTCTTTTAT TATAGAGAAA
AGTGGGGCAC TTACCGATAT TAAAGTGGAG CGAAAACTGG GTTATGGTAC AGACGAAGAA
GCTGTTAGGG TGTTAAAAGC CAGCCCTAAA TGGATGCCTG GAATTCAAAA TGGTAGAGCT
GTACGTGTGA AATATAACAT TCCTATCAGC TTTTCATTGG CTCAATAA
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| Protein sequence | MLGSKIDLFG NEWLDVVFDQ KNKSYGAYAL RRQSSSDTAK ALFIAGSLFV LFFLSPKIIK
LIKGNETIEV LPERKTEVIV QPPPAIDPET LPPAAIEPPP AKQDQVKFLP PKVIQDDLVK
DVDPVQISDL KEATPGPKNV IGEPDGVIVI EGPTGKGPKG AVATEDNTVY DVFNALEVQP
VFPGGMEKFY AYLSKSIRYP AAAQEINLQG KVFLSFIIEK SGALTDIKVE RKLGYGTDEE
AVRVLKASPK WMPGIQNGRA VRVKYNIPIS FSLAQ
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