Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2556 |
Symbol | |
ID | 8253663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2976645 |
End bp | 2977604 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644936206 |
Product | glycoside hydrolase family 43 |
Protein accession | YP_003092822 |
Protein GI | 255532450 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3507] Beta-xylosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.149373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAAAA AGAGCTACGT GTTAATATGT TTATTGCTGA TTTGCACACT GTTGTCTGCA AGTGGTATTG CTCAGGAAAG AAGGGTAATT ACCGTTGCAG ATCCAACTAT TTTCTACCAT GAACATACTT ACTACCTGTA TGGAACTGCA GATAACGAGG CGCAAAAAGG GTTTAAGGTA TACATTTCAA AAGATAAGAA AAGTTGGAAA GATGGGGGGA CAGTGCTAAA AAAAGAAGAT GTGTTTGGCA CATCTGGCTT CTGGGCACCA CAAATTTTTA AGTATCAAGA CAAATTTTAC CTGGCTTATG TTGCCGATGA ACGAATTGCT ATTGCCGAAA GCGACGGACC AAAGGGCCCC TTCACTCAAA AAGTGAAGAA AGCAATTGAC GCTCCTGTCA GAATTATCGA TCCTTTTATA TTTTTTGACT CTGGTAAAAT TTATTTGTAT CATGTTCGGC TCGACAAGGG CAACCGCATT TATGTTACTG AAATGAATAG CGATCTCTTA TCTATTAAGG AAGAGACAAG CACAGAATGC ATACATGCCA GCGAGAATTG GGAAAATACA AGTGGAGCAA GCTGGACTGT AACCGAGGGG CCGTCTGTTT TAAAAAGGGG GAATGTTTAT TATATGTTTT ATTCAGCAAA TGATTTTCGT AACCCGGATT ATGCTGTTGG TTATGCAACC AGCGACAGTC CTTATGGGCC TTGGGTTAAA TATAAAGGAA ACCCCATTTT AAGCAAGCTT CAAACCAATG AGAATGGCTC TGGCCATGGA GATTTTTTTG AAGATGAGAA AGGAAAGTTT AATTATGTTT TCCATACTCA CGAATCCAAT AATAAGCCCA ACGGAAAAAG AAGAACAGCT ATAATTTTGA TGAAATTTTT GGAAGGAAAG CACAAAACGG AAAAATTGTA CACCTATAAG GGGACATTCC GTTTTTTAAC TCAGCAATAG
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Protein sequence | MLKKSYVLIC LLLICTLLSA SGIAQERRVI TVADPTIFYH EHTYYLYGTA DNEAQKGFKV YISKDKKSWK DGGTVLKKED VFGTSGFWAP QIFKYQDKFY LAYVADERIA IAESDGPKGP FTQKVKKAID APVRIIDPFI FFDSGKIYLY HVRLDKGNRI YVTEMNSDLL SIKEETSTEC IHASENWENT SGASWTVTEG PSVLKRGNVY YMFYSANDFR NPDYAVGYAT SDSPYGPWVK YKGNPILSKL QTNENGSGHG DFFEDEKGKF NYVFHTHESN NKPNGKRRTA IILMKFLEGK HKTEKLYTYK GTFRFLTQQ
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