| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2555 |
|---|
| Symbol | |
|---|
| ID | 8253662 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2973438 |
|---|
| End bp | 2976602 |
|---|
| Gene Length | 3165 bp |
|---|
| Protein Length | 1054 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644936205 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003092821 |
|---|
| Protein GI | 255532449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.291539 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTA AAACTTTAAC AGCAATTGTT TTCATTAGCG CCCTGGTCCT TATACTTGGT
TTTCAACTGG GGGGCAGGAA ATTAAAGGCT GATGGTTTTG AGGTATTGAA AAAAGCCTTC
AAAAATCCTG GTAATGAATA TGGCACCACC CCATTCTGGG TTTGGAACAC TAAGGTAAGC
GGGGAAATGA TAGATTCTAT GATGCTGGAC TATAAGAAAA ATGATTTCGG AGGAGTAATC
GTCCACGCCC GGCCCGGACT GATCACTGAA TATTTATCTG ATGAATGGTT CAGTTTATTT
GAATATGCCC AGCAAAAGGG AAAACAATTG GGTCTGAAGG TCTGGATTTA TGATGAAAAT
TCTTATCCTA CCGGGTTTGG GGGTGGTTTG GTGCCCGACC AGATGCCGGA ATCGTACAAT
CAGGGCCAAA TGCTATATAT GAGTGAAGTA ACAGCTATTC CGGGTAATCT GGAAGAGGTT
TTAATAGTCC TTAGAGAAGA CAAGGGACAG TTTACGGACA TAAGTTTAAG CCTGGCCGCA
GAGAAGGGTA AAGCAGGGAA ATACCGGATT TTCAAAAAAG TGAATTATCA AAAGTCTAAC
CGTGGAACGG TGGCAGGGCC TATTGGCTCT TCTTACGTAG ACCTGATGGC CAAAGGCGTT
ACACAAAAGT TTATGGACAT TACCTTTAAA GGATATGAAA AAGTTGCAGG CCATGAATTT
GGCAAAACTG TTCCGGGTAT CTTTTCTGAT GAACCAACCA TTATCAATGA GGGTAAGGAT
TGTGTACGCT GGACACCCGA CCTGTTTGCG CATTTCAAGG AAAAATGGGG TTATGACCTG
CGTCTTCAGC TGCCATCGCT ATTTGAGGAA ACCGGTAACT GGAAAAAAGT AAGACACAAC
TATTACCAAA CGCTGTTGCA ACTGTTTATC GACAGATGGT CTAAACCTAT GTTTAATTAT
ACCGAGCAGC ACAACCTGAT CTGGACGGGG CATTACTGGG AACACGGCTG GCCAAGCCCT
TACCATGGGC CCGACAATAT GACCATGTAT GCCTGGCACC AGATGCCTGG AATTGACATG
CTGTTTAACC AGTACAATGA AGATAAACCC GTACAGTTTG GAAACATCAG GGCGGTTAAA
GAACTGGGTA GTGTAGCCAA TCAACTTGGA AAAAAAAGAA CGCTTTCCGA AACCTATGGT
GGTGGCGGCT GGGAGCTGAC TTTTAAGGAC ATGAAGCGGT TGGGCGACTG GGAGTTTGTG
CTTGGCGTGA ATTTTATGAA CCAGCACCTG TCGTTCATGA GTATTACCGG AGCAAGAAAA
TACGATTATC CGCCGAGTTT TTCTTATCAT GAGCCCTGGT GGCCTTTCTA TAAAACGCTG
AACCAATATT TTTCCCGGTT GTCGCTCTGC CTGTCAACGG GCCAGCAAAA AAATGATGTA
CTGGTTTTGG AACCCACTAC TTCTGCATGG ATGTATTATT TCAGAGGTAA AGAGAACAAA
CGGTTTTTTG AAATCGGGAA AAATTTTAAT GATTTTGTAA CTACCCTGCA AAGGGCGCAT
GTTGAATATG ACCTGGGTTG CGAGAACATT ATCAAAGATC AGGGAAAGAT TGAAAGCGGA
AAATTCGTTA TCGGCCAGCG TGCTTACAGT ACCGTTGTCA TTCCACCTGG TATGGACAAT
ATTGACCGCC CTACATTTAA TTTATTGAAA GAATATGCCC GTCAGGGCGG CAAAGTGATC
TTATTTGAAA AGCTTAGCTG TTTAGATGGG GATGCCAATG ACGCACTGGA TTTTTTTACA
GCTGCTAAAA GCAATGTTTT GCTGGCTGTT GGTGCCGCTG AACAACAGAT CATCCAAAAT
CATTTGCTGC CTGCAGACAT CCGGATATCG GCTGTAGGCA ATAATAGGAT AGGTGGTAAT
TTGTATTACC AACGCAGACA ATTGGCTGAC GGGCAATTGA TTTTCCTTTC AAATGCGAGT
ATGGAGGCCG CTTCAAAAGG TATGGTTACG GTTAATGGTA AAGACGCATT GATGATGGAC
CTGTTCAGTG GGGGGATTTA TGATTATCCG GAAAAAGAAA GCTCCGGTAA GCTTAGTTTT
AAATTTGATA TTCCAGCAGC GGGAAGCATG ATGTTTTTTG TGGCCGATAA GAAACAAACG
GGTTTCAAAG CACCTGCTTT AAATCGGGCT GAAACACTTG TAAAAACAAG CCAGTCAAAA
GTACTTCGCC CCGCAGAAAA TACGCTAATG ATTGACTTTT GTGACCTGGA ACTCAAAAAA
CCCGATACCG CTTATCGGGA CTTGCATGTT GGCATCGCTT CTAATACAGC TTTTAAACAT
TTTGGATTTA AAGATGGTGT AGGCAATCCA TGGAATAACC GTACCCAGTT TAAAGATCGG
ATTGTTGCCC GCGACACTTT TTCGGTAGGT ACCGGATATA TGGCGACCTA CCGTTTTGAA
ATAGCCCAAA ATGTTAACCT GAAAAATTTT CGTGCAGTAG TAGAACAACC AGGCTTGTGG
AATAGTGTGT CTGTAAACGG AACAAAGGTA AAGGCTTTGA AAGGTAAATG GTGGCTTGAC
CGTTCTTTTG GGGTTTTTGA AATTGGCAAT TACCTTAAGC CGGGTAAAAA CAGTATTTCA
CTGGCTGTTT CGCCAATGCG TGTTTATGCA GAAATAGAAC CTGTATATAT ATTGGGCGAC
TTTAACCTTG TTCCGGCAGT AAAGGGCTGG GAAATAACTG CAGCTGCACC GCTTACATTT
GGACCCTGGA ATAAACAGGG GCTGCCGTTA TATGGACAGG GTATCAGCTA TGTAAAGGAG
TTTCAGGTTC AGACCATGGG CAAGGAATAT GCCGTTAAAC TGAAAAAGTG GAAAGGCACA
GTGGCTGCAG TAAAAGTTAA CCATGTGCTT GCAGGAATTA TCAGTTCGGA ACCTGATGAA
CTTAATATTA CCCCTTATCT TAAAAAAGGC CTTAACCATG TTGAAATTGA GGTGATTGGA
AGTCTTAAGA ATTTACTTGG CCCACATCAC AATAAACCCT TACCTGGTTT GGTAGATCCC
GGCAAATGGT ATAATGTTAA AACATACCCT TCAGGAAATG ATTATCAGAC TTATGGTTAT
GGTTTGGAAG AAGATTTTGA TATTCATGAG ATCATCCCCC GATAA
|
|---|
| Protein sequence | MKFKTLTAIV FISALVLILG FQLGGRKLKA DGFEVLKKAF KNPGNEYGTT PFWVWNTKVS
GEMIDSMMLD YKKNDFGGVI VHARPGLITE YLSDEWFSLF EYAQQKGKQL GLKVWIYDEN
SYPTGFGGGL VPDQMPESYN QGQMLYMSEV TAIPGNLEEV LIVLREDKGQ FTDISLSLAA
EKGKAGKYRI FKKVNYQKSN RGTVAGPIGS SYVDLMAKGV TQKFMDITFK GYEKVAGHEF
GKTVPGIFSD EPTIINEGKD CVRWTPDLFA HFKEKWGYDL RLQLPSLFEE TGNWKKVRHN
YYQTLLQLFI DRWSKPMFNY TEQHNLIWTG HYWEHGWPSP YHGPDNMTMY AWHQMPGIDM
LFNQYNEDKP VQFGNIRAVK ELGSVANQLG KKRTLSETYG GGGWELTFKD MKRLGDWEFV
LGVNFMNQHL SFMSITGARK YDYPPSFSYH EPWWPFYKTL NQYFSRLSLC LSTGQQKNDV
LVLEPTTSAW MYYFRGKENK RFFEIGKNFN DFVTTLQRAH VEYDLGCENI IKDQGKIESG
KFVIGQRAYS TVVIPPGMDN IDRPTFNLLK EYARQGGKVI LFEKLSCLDG DANDALDFFT
AAKSNVLLAV GAAEQQIIQN HLLPADIRIS AVGNNRIGGN LYYQRRQLAD GQLIFLSNAS
MEAASKGMVT VNGKDALMMD LFSGGIYDYP EKESSGKLSF KFDIPAAGSM MFFVADKKQT
GFKAPALNRA ETLVKTSQSK VLRPAENTLM IDFCDLELKK PDTAYRDLHV GIASNTAFKH
FGFKDGVGNP WNNRTQFKDR IVARDTFSVG TGYMATYRFE IAQNVNLKNF RAVVEQPGLW
NSVSVNGTKV KALKGKWWLD RSFGVFEIGN YLKPGKNSIS LAVSPMRVYA EIEPVYILGD
FNLVPAVKGW EITAAAPLTF GPWNKQGLPL YGQGISYVKE FQVQTMGKEY AVKLKKWKGT
VAAVKVNHVL AGIISSEPDE LNITPYLKKG LNHVEIEVIG SLKNLLGPHH NKPLPGLVDP
GKWYNVKTYP SGNDYQTYGY GLEEDFDIHE IIPR
|
|---|
| |