Gene Phep_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2548 
Symbol 
ID8253655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2963332 
End bp2965197 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content43% 
IMG OID644936198 
Productsulfatase 
Protein accessionYP_003092814 
Protein GI255532442 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA GTTTGCTCTT CTTTCTGCGC TTCTTTTTGT TTTGGCTGTT GTTCTTCTTT 
ATAGACCGCC TGATATTTAT ATTCATTTAC CATAGGCAAC TGGCATCGGT TCCATTATCA
GAAAGGCTGG CTACTTTTTA CCATGCCATT CCCTTAGATT TATCTATGAC AGCTTATCTG
GCTGTCATTC CACTTTTAAG CTATATTTAC TGGCTGTTAA ACGGCCGTAA AATTGTAGAG
TTGAAATGGA TAGCTGTTTA CAACACCGTC CTCATTGTCA TATTCAGCAT TCTTGCGGTA
GTTAATTTCA ACATTTACCG CGAATGGGGC AGCAAGGTAA ACGCAAAGGC ACTTGGTTTT
GCCTTTTCAT CACCCCGGGA AGCCATGGCC TCCAGTGCTT CCTCACCCAT TGGCCTTTCC
ATCTCATTAC TCATCCTGTT AATTGCACTG GGTCTGTTTC TGCAACGCTA TGTAGTATCC
AGGAAACTCA GTTTTACTCA AACACCGATC TCGCTCAGGG CAATCGCTTG CCTTTTCTTA
ATTGCCTGTA ATTTCCTGTT GATCAGAGGT GGTTTGGGTA AATCCCCTAT TACGCAGAGT
ATGGCTTATT TTTCGAAAGA CCAGGTGCTT AACCATGCGG CAGTAAATAC AGAGTGGAAC
TTATTGTCGA GCCTGCTGGC TTCCAGAATG ACGAAGACCA ACCCATATAT ATATATGGAC
AAGCAACTGG CCGAACAAAA TACCAAAGCA CTATATACTA CCGCAAAAGA TACCACCGTT
AGCCTACTCA ACACCAAACG CCCCAATGTG GTGCTCATAA TTATTGAAAG CTTTACAGCC
GATCTGACCA AGACCCTTGG CGATGAAGAC GGGATAACTC CGCATTTTGA TACATTAATG
CACAAGGGTG TGCTTTTCAG TCAGATCTAC TCTCCAGGTA GCCGTACCGA TAAAGGTCTG
ATGGCAGCAC TGGCAGGCTT CCCTACACTT GCCGCAGGCA GTATTGTAAA ATGGCCTGAA
AAAATGCAGA AGATTCCCGC TATCTCGCAG GTGCTCTTTA AAAATGGTTA CCATACCTCT
TTCTTTTATG GTGGGGAGTC GGAATTCGAC AATTACAAAG CCTTTATCCT GAGCCACGAT
TACCAAAAGC TGGTAGACAA GAACAGCTTC AAAGGCAATG AAATGAAATC GCCCTGGGGC
AAGTACGATG AGCTGGTATT TGCAAGGCAG CTTGCCGATT TAAACCGTGA GCAGCAGCCC
TTCTTTTCTA CCCTGCTTAC CCTTACCAAT CATGAGCCAT ATACTTTACC GGGTACACCT
AAATTTGGCA ATACGGATAA TGTAGCAAAG TTTAAAAGCA CAGCTTATTA TACCGATTCC
TGCATCAATG CCTATTTGAC AACGGCCAAA AAGCAGACCT GGTACAAAAA CACCCTTTTT
ATATTTGTAG CCGACCATGG GCATGTATTG CCAAAAAACA GGCAGGACAT TGCTGTACCG
CAGCGTTATC ACATTCCACT CCTGTTTTAC GGAGAGGTAA TCAAAAATGA ATTTAAAGGT
AAAAGGTTTG ACCGGATAGG TAGCCAGACA GATATTGCAG CCACCTTACT GGCCCAGCTT
AACCTGCCTG CAACTACGTT TACCTGGAGC AAAAACCTGT TAAACCCTTA TACCAAACCA
TTTGCTTTTT TTAGCTGGGA CAACGGAATG GGTTTTATTG ATAACCAGCA ATGTGTTACC
TTTGATAATG TAGGCAAAAT GATATTGTAC AACAGCAATG CGGCCGATAA AGCACAAACA
GCAAAAACCC TTGATCATGC AAAAGCATAT CTCCAAAATG TATATCGTCA ATTTATAGAA
CTTTAA
 
Protein sequence
MLKSLLFFLR FFLFWLLFFF IDRLIFIFIY HRQLASVPLS ERLATFYHAI PLDLSMTAYL 
AVIPLLSYIY WLLNGRKIVE LKWIAVYNTV LIVIFSILAV VNFNIYREWG SKVNAKALGF
AFSSPREAMA SSASSPIGLS ISLLILLIAL GLFLQRYVVS RKLSFTQTPI SLRAIACLFL
IACNFLLIRG GLGKSPITQS MAYFSKDQVL NHAAVNTEWN LLSSLLASRM TKTNPYIYMD
KQLAEQNTKA LYTTAKDTTV SLLNTKRPNV VLIIIESFTA DLTKTLGDED GITPHFDTLM
HKGVLFSQIY SPGSRTDKGL MAALAGFPTL AAGSIVKWPE KMQKIPAISQ VLFKNGYHTS
FFYGGESEFD NYKAFILSHD YQKLVDKNSF KGNEMKSPWG KYDELVFARQ LADLNREQQP
FFSTLLTLTN HEPYTLPGTP KFGNTDNVAK FKSTAYYTDS CINAYLTTAK KQTWYKNTLF
IFVADHGHVL PKNRQDIAVP QRYHIPLLFY GEVIKNEFKG KRFDRIGSQT DIAATLLAQL
NLPATTFTWS KNLLNPYTKP FAFFSWDNGM GFIDNQQCVT FDNVGKMILY NSNAADKAQT
AKTLDHAKAY LQNVYRQFIE L