Gene Phep_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2546 
Symbol 
ID8253653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2961846 
End bp2962625 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content44% 
IMG OID644936196 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003092812 
Protein GI255532440 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC CCCTGGTTTT GTATACGGTA AGCCAGCGTA TAGCTACCAT ATCTATTAAC 
CGACCCGAAA AACGCAATGC ATTAAATTCC GAGCTGGTAG CCCGGCTGAC CGCTGCATTT
GTAAGGGCAT CGGAAGATCC TGCAGTTAAG GTGGTCATTT TAAAAGCCAA TGGCACTACC
TTTAGCGCGG GGGCCGATCT GGCTTACCTT CAGCAGCTTC AGCAAAACAG CTACGAGGAA
AACCTGGCCG ATTCTGAAAA TTTAAAACGC CTGTTTACCA CCATTTATTA CCTGCCCAAA
GTAGTGATTG CCCAGGTTGA AGGTCATGCC ATTGCGGGCG GATGCGGTTT GGCAACGGTA
TGCGATATTG TATTTGCCGT GCCTGAAGCC AGCTTTGGCT ATACCGAAGT AAAACTTGGT
TTTGTACCAG CAATTGTAGC CTGTTTTTTA TTGCGCAAAA CCAGCGAAAC CATCGCCAAA
AAATTGTTGC TTACCGGAAT TCTGTTTACT GCTGAAGAGG CTTTAAGCTA TGGACTCATC
ACTTTTGTAA CAAAGAAAGA AGAGATCAGT CTTAATGTAA ACAATTTTGC ATTAAGTTTG
TGCAATGAAG CTTCTGCTAA TTCGTTAATG GTAACTAAAC AGCTGATCGG GCAGACCACA
AATCCGGAAC TCGATAATTG TCTGGCCGCG GCCGTACAGC TCAATGCCAG CGTTAGGGAA
ACTGAAGATT TTAAAAAAGG TGTTGCTGCC TTTATCAGCA AAGAAAAAAT TAACTGGTAA
 
Protein sequence
MTEPLVLYTV SQRIATISIN RPEKRNALNS ELVARLTAAF VRASEDPAVK VVILKANGTT 
FSAGADLAYL QQLQQNSYEE NLADSENLKR LFTTIYYLPK VVIAQVEGHA IAGGCGLATV
CDIVFAVPEA SFGYTEVKLG FVPAIVACFL LRKTSETIAK KLLLTGILFT AEEALSYGLI
TFVTKKEEIS LNVNNFALSL CNEASANSLM VTKQLIGQTT NPELDNCLAA AVQLNASVRE
TEDFKKGVAA FISKEKINW