| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2540 |
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| Symbol | |
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| ID | 8253647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2954477 |
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| End bp | 2955172 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936190 |
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| Product | response regulator receiver |
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| Protein accession | YP_003092806 |
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| Protein GI | 255532434 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.255276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATAC TGCTTATAGA AGATGAAGCA TCGCTTAGAG AAAGTATTAT TTCATATTTT
ACCGGGGAAG GGAATATTTG TGAGGCTGCG GTAGATTTTA ATTCAGCCTT GGAGAAAATC
AGCATCTATA ACTACGACTG CATTTTGCTC GACCTGAGTT TGCCTGGGGG GGATGGGATG
GAAATTCTGC GCAGTTTAAA AAAAATGAAC AAAAAAGAAG GGGTGCTTAT TATTTCGGCA
CGTCAGGCTT TGGATGATAA GATTGATGGG TTAAACCTTG GTGCAGATGA TTACCTGATC
AAACCCTTTC ACCTTTCTGA ACTTAAGGCC AGGGTAGCGG CAATTGTAAG GCGTAAAAGT
TATAATGGCA GCAATACCAT TGTTTTTAAC GAGATCAGCA TTGACACGCT GGCAATGAGC
GTTTCTATAA AACCGGAATT GGCCAGACTA CCGGGAATTT TGACCCTTAC AAAAAAGGAA
TACGACCTGC TGGTTTACTT TATTGCCAAC CAGGGAAAGG TGATTTCTAA AAATGCACTT
GCCGAACATT TATGGGGGGA TGAAATTGAT CTGGCCGATC ATTTTGATTT TATTTATACC
CATATCAAAA ACCTGAGGAA AAAGCTGGTT GAGGCTGGCT GTCCGGATTA CATCAGGTCG
ATGTACGGTG TCGGATATAA GTTTGAAAAC CAATGA
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| Protein sequence | MKILLIEDEA SLRESIISYF TGEGNICEAA VDFNSALEKI SIYNYDCILL DLSLPGGDGM
EILRSLKKMN KKEGVLIISA RQALDDKIDG LNLGADDYLI KPFHLSELKA RVAAIVRRKS
YNGSNTIVFN EISIDTLAMS VSIKPELARL PGILTLTKKE YDLLVYFIAN QGKVISKNAL
AEHLWGDEID LADHFDFIYT HIKNLRKKLV EAGCPDYIRS MYGVGYKFEN Q
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