Gene Phep_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2531 
Symbol 
ID8253638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2940004 
End bp2941176 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content43% 
IMG OID644936181 
ProductFecR protein 
Protein accessionYP_003092797 
Protein GI255532425 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGG AACAGATCAA TGACCTGATT AAAAAATATA CTGCAGGTAC AGCAACTAAT 
GAAGAGCGTG AACAACTGCA TCAATGGTAC CGGGATGTCG CTTATGCGGA TGCTGAATAT
CCTGATGACG AACATCTTGT ACACAAAAGA ATGCTGGAAC GCCTGCAACG TGAAATTATA
CCGTTAAGAA AATCAAAGGT GCTGATCCGG AGGATAGCGG CAGCTGCTAC TGTTTTCTTA
TGTCTGACAG CAGGCTTTTA TTTTTATAGG GTCAGATATA AGACTGCAGA AACAACAGCG
CTTTCTTATG ACGTTGAACC GGGTGGCAAT AAAGCTGTAC TTACCCTGGT AAATGGCAGT
AAGGTAAACT TAAGTGGAGT TAAAAGTGGC ATAGTGATCA ACACCACAAC ATTAACTTAT
AATGATGGAA GTAAAGTTCA GGTTTCCCCC CGGACTGAGG ACTTATATCC TGGTGCTATG
CCGGGATCAG GTCCTTCATC ACAACAGGAA ATGATGGTCA GCACCCCAGA TGGTGGTACT
TACCAGGTTG TTTTACCGGA TAGTACCAGG GTATGGCTGA ATGCCGCTTC CAGTTTGAAA
TTCCCGGCCA CATTTTCGGG TTTGGATAGC AGGAAAGTTG AGCTTAACGG CGAAGCTTAT
TTTGAAGTGG CAAAGATCAG GACCAAGTCT AAAACATCTG CCGCAGGTGC CAGAGTACCA
TTTATCGTAG TCAGCAAAGG TCAGGAAGTA GAAGTACTGG GAACCCATTT TAACATCAGT
GCCTATACCA ATCAGGCCGC TACAAAAACA AGCTTACTGG AGGGACTCGT CCGCATTAAA
AATGATAAAG GAAATGCCCT GCTTAAACCT GGTCAGCAGG CCATTAACGG TGCAAAAGGA
ATAGAACTGG TAAGTGGTGA TGCAGAAGAT GCAATAGCCT GGAAAAATGG CTATTTCATG
TTTGATAATG AAGATCTGGC CAGTGTAATG GCAAAGCTTT GCCGTTGGTA CAATGTAAGT
GTGAACTATG AAGATGAAGC GGTTAAAAGT GTAAAGTACT ATGGCACCAT AAGCCGTTTT
GAAAAAATAT CAAAGGTGCT GACCAAGCTC GAAACTACTG GTAACCTGAA ATTTGAAGTG
AAAGGGAAAA CAGTTCATGT GTCCGAGAAA TAA
 
Protein sequence
MKQEQINDLI KKYTAGTATN EEREQLHQWY RDVAYADAEY PDDEHLVHKR MLERLQREII 
PLRKSKVLIR RIAAAATVFL CLTAGFYFYR VRYKTAETTA LSYDVEPGGN KAVLTLVNGS
KVNLSGVKSG IVINTTTLTY NDGSKVQVSP RTEDLYPGAM PGSGPSSQQE MMVSTPDGGT
YQVVLPDSTR VWLNAASSLK FPATFSGLDS RKVELNGEAY FEVAKIRTKS KTSAAGARVP
FIVVSKGQEV EVLGTHFNIS AYTNQAATKT SLLEGLVRIK NDKGNALLKP GQQAINGAKG
IELVSGDAED AIAWKNGYFM FDNEDLASVM AKLCRWYNVS VNYEDEAVKS VKYYGTISRF
EKISKVLTKL ETTGNLKFEV KGKTVHVSEK