| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2521 |
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| Symbol | |
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| ID | 8253628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2925223 |
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| End bp | 2925945 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936171 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003092787 |
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| Protein GI | 255532415 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTACC CAAATTTTAA AGATCTCATA CTGTTTGAAA ACGATGATTA TGTCGTAGTA
AATAAACCGC CCTTCGTCGC ATCATTAGAT GAACGTGGCG GCTCAGGAGA AGTGAACATT
CTCCGCCTGG CAAAGCAATA TACAGCTGAT GCACAGGTAT GTCACCGTTT AGATAAGGAA
ACGTCAGGTG CCATTATTAT CGCCAAAACA CCAGAAGCCT ACCGTAACGT TGCCATGCAA
TTTGAAAAAC GTAAAGTAAA TAAAACTTAT CATGCGGTAG TTGACGGACA GTTTACATTC
AAAGAATTGT TTATCGACCT CCCCATTTTA AATGATGGTA ATAAAAGTGT GACCATCGAC
CGTAAGGAAG GCAAACGTGC AGAAACCATA TTCAATACGT TGAAACATTA CAGGCATTAT
ACACTGGTAG AATGCAAGCC CATTACCGGG CGCATGCACC AGATCAGGAT ACACCTGGCT
ACACAACGTG CAGCCATTGC CGGCGACGAT ATGTACCGGG GCAAGCCTGT ATACCTTTCC
AGCTTAAAAA AAGGTTACCG TTTGGCAAAA GATGAAGAGG AACAGCCCAT TATGAAGCGT
TTTGCACTTC ACGCGCGGCA CCTGGTGTTT AAGGGACTGA ACGGACAGGA TATTGTAATT
GAGGCTCCTT ATCCTAAAGA TTTTGCTACA CTGATTAAAT TACTGGACAA GTTCGACGCT
TAA
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| Protein sequence | MKYPNFKDLI LFENDDYVVV NKPPFVASLD ERGGSGEVNI LRLAKQYTAD AQVCHRLDKE
TSGAIIIAKT PEAYRNVAMQ FEKRKVNKTY HAVVDGQFTF KELFIDLPIL NDGNKSVTID
RKEGKRAETI FNTLKHYRHY TLVECKPITG RMHQIRIHLA TQRAAIAGDD MYRGKPVYLS
SLKKGYRLAK DEEEQPIMKR FALHARHLVF KGLNGQDIVI EAPYPKDFAT LIKLLDKFDA
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