Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2505 |
Symbol | |
ID | 8253612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2906042 |
End bp | 2907115 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936155 |
Product | hypothetical protein |
Protein accession | YP_003092771 |
Protein GI | 255532399 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.13021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.390967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAC TACTATTGTT ATCGGCAGTC TTAAGTACTG TCGCAGGCTA CAGCTATGGG CAGACCGAAC CGAAAATTAA GGTGTCTGGC TACCTGGAAA CTTATTACGG ATACGATCTT AACAAACCAT CAGATAACAA CCGCCCCGGT TTTATTTATT CACACAACCG TCACAATGAG GTAAACCTGA ACCTGGGTTT TATTAAAGGG GCCTATGATG ATGGAAACAT CAGGGCAAAT GTAGCCTTGA TGGCCGGTAC GTATACCAAT GCCAATATGG CTGCTGAACC TGGTGTGCTA AAAAATATTT ATGAGGCCAA TACAGGCTTA AAGCTTTCTA AAACACTTAA CCTCTGGCTT GATGCAGGTA TATTTGCTTC ACATATTGAT TTTGAAAGTG CGGTATCCAA AGACTGCTGG GTATTGACCC GGAACATTTC CTCAGAAAAT ACACCTTACT ATGAATCGGG TGCCAAGCTC AGTTATGCCA GTAAGGATGG CAGTTTTGCT GCTACCTTGC TTTACTTAAA CGGCTGGCAG CGCATTAACC GCCTCAATGG CAACAGCAAG CCTGCAGGTG GCTTGCAGCT GACCTGGAAA CCTACAGCAA AAATCACCCT TAATTATAGC AATTACCTGG GAACAGAGGG CAGCGACGCC CTACGTGTAA ACCGCTTTTA TCATGATGTA TATGGAATTT TTGAATTGAC AGACGATTTC GGTCTGACCC TGGGGCTCGA CTACGGTACC CAGCAGGAGG CTAAAGGGAG TAAAAAACAC AATGAGGTAT TTGCACCGGT AGCCATAGCC CGTTATAACA TTTCTGATCA ATGGAAAGTG GCGGGCAGGG TAGAGCATTA CCAGGATAAA AATGGTATTT TTATAGTTAC AGGTACATCC AACGGCTTTA AAACCACTGG TTATTCTTTA AATGTTGACT ATGCCCCCAT CAGCAATGCG GTAGTAAGGC TGGAAGGGAA GCTTTACGAT AGCAAGGATA AAATATTTAT CAAAAATGAA AATATAGTGA ATACCAACGC TGCAGTTACA GCAAGTATTG CAGTTTCTTT TTAA
|
Protein sequence | MKKLLLLSAV LSTVAGYSYG QTEPKIKVSG YLETYYGYDL NKPSDNNRPG FIYSHNRHNE VNLNLGFIKG AYDDGNIRAN VALMAGTYTN ANMAAEPGVL KNIYEANTGL KLSKTLNLWL DAGIFASHID FESAVSKDCW VLTRNISSEN TPYYESGAKL SYASKDGSFA ATLLYLNGWQ RINRLNGNSK PAGGLQLTWK PTAKITLNYS NYLGTEGSDA LRVNRFYHDV YGIFELTDDF GLTLGLDYGT QQEAKGSKKH NEVFAPVAIA RYNISDQWKV AGRVEHYQDK NGIFIVTGTS NGFKTTGYSL NVDYAPISNA VVRLEGKLYD SKDKIFIKNE NIVNTNAAVT ASIAVSF
|
| |