Gene Phep_2505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2505 
Symbol 
ID8253612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2906042 
End bp2907115 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content43% 
IMG OID644936155 
Producthypothetical protein 
Protein accessionYP_003092771 
Protein GI255532399 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.13021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.390967 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TACTATTGTT ATCGGCAGTC TTAAGTACTG TCGCAGGCTA CAGCTATGGG 
CAGACCGAAC CGAAAATTAA GGTGTCTGGC TACCTGGAAA CTTATTACGG ATACGATCTT
AACAAACCAT CAGATAACAA CCGCCCCGGT TTTATTTATT CACACAACCG TCACAATGAG
GTAAACCTGA ACCTGGGTTT TATTAAAGGG GCCTATGATG ATGGAAACAT CAGGGCAAAT
GTAGCCTTGA TGGCCGGTAC GTATACCAAT GCCAATATGG CTGCTGAACC TGGTGTGCTA
AAAAATATTT ATGAGGCCAA TACAGGCTTA AAGCTTTCTA AAACACTTAA CCTCTGGCTT
GATGCAGGTA TATTTGCTTC ACATATTGAT TTTGAAAGTG CGGTATCCAA AGACTGCTGG
GTATTGACCC GGAACATTTC CTCAGAAAAT ACACCTTACT ATGAATCGGG TGCCAAGCTC
AGTTATGCCA GTAAGGATGG CAGTTTTGCT GCTACCTTGC TTTACTTAAA CGGCTGGCAG
CGCATTAACC GCCTCAATGG CAACAGCAAG CCTGCAGGTG GCTTGCAGCT GACCTGGAAA
CCTACAGCAA AAATCACCCT TAATTATAGC AATTACCTGG GAACAGAGGG CAGCGACGCC
CTACGTGTAA ACCGCTTTTA TCATGATGTA TATGGAATTT TTGAATTGAC AGACGATTTC
GGTCTGACCC TGGGGCTCGA CTACGGTACC CAGCAGGAGG CTAAAGGGAG TAAAAAACAC
AATGAGGTAT TTGCACCGGT AGCCATAGCC CGTTATAACA TTTCTGATCA ATGGAAAGTG
GCGGGCAGGG TAGAGCATTA CCAGGATAAA AATGGTATTT TTATAGTTAC AGGTACATCC
AACGGCTTTA AAACCACTGG TTATTCTTTA AATGTTGACT ATGCCCCCAT CAGCAATGCG
GTAGTAAGGC TGGAAGGGAA GCTTTACGAT AGCAAGGATA AAATATTTAT CAAAAATGAA
AATATAGTGA ATACCAACGC TGCAGTTACA GCAAGTATTG CAGTTTCTTT TTAA
 
Protein sequence
MKKLLLLSAV LSTVAGYSYG QTEPKIKVSG YLETYYGYDL NKPSDNNRPG FIYSHNRHNE 
VNLNLGFIKG AYDDGNIRAN VALMAGTYTN ANMAAEPGVL KNIYEANTGL KLSKTLNLWL
DAGIFASHID FESAVSKDCW VLTRNISSEN TPYYESGAKL SYASKDGSFA ATLLYLNGWQ
RINRLNGNSK PAGGLQLTWK PTAKITLNYS NYLGTEGSDA LRVNRFYHDV YGIFELTDDF
GLTLGLDYGT QQEAKGSKKH NEVFAPVAIA RYNISDQWKV AGRVEHYQDK NGIFIVTGTS
NGFKTTGYSL NVDYAPISNA VVRLEGKLYD SKDKIFIKNE NIVNTNAAVT ASIAVSF