Gene Phep_2481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2481 
Symbol 
ID8253588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2879311 
End bp2880528 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content46% 
IMG OID644936131 
Producthypothetical protein 
Protein accessionYP_003092747 
Protein GI255532375 
COG category[S] Function unknown 
COG ID[COG4339] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.280099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGTT CAGGTTCTGA TAAAAACATA AAAGAGATGC AGTACCGGGA AATATTAGAT 
CAGCTTCGTA CCCATGTTGC AAGCCTGTTC CATGCGCACA ATGATGCGCG TTTTATTTAT
CATAACCTGC ACCATACCGA GCAGGTAGTA GAAAATACGG TTAAAATTGC CAGCCATTAC
CAGTTGTCAG ATCAGGATTT CTTTATAGTA ACGGCCGCCA GCTGGTTTCA CGATCTGGGC
TATTTGTTCG ATTGCCGTCA GCATGAGGCC CGCGGAGAAA TCATGGCAGC CGAATTTTTA
ACCGGTAAAG GGGTAAATCC TGAGATCATT GCTCAGGTCA GCGGCTGTAT CCTGGCCACA
AGGATGCCCC AAAATCCGGT CGGACTGCTG CAACAGATCG TTTGTGATGC CGACCTCTTT
CATCTGGGCA GCGACAGCTT TAAAGAACGG AATAAGCTGA TGCGCAGGGA AGCCAGTGCA
TTTTGCAATA AAGAAATTGA TAAAACGGAG TGGAGGGTTA AAACCATAGC CCTGTTCAAA
GCACATCATT ACCATACAGA TTTTTGCCGT CAGCTGCTCG ACGCCAAAAA AGCACAAAAC
CTTGCCGAAA TGGAACATAA GCTCACTCAT CCAGCCCCAT TGGAAACTAC AGCAATTGTA
AAAAAAGAAA AAAAGAAAAA GAGCGACAGG CCGGAGCGGG GTGTCGAAAC CATGTTCAGG
ATCTCCTCCA CCAATCACCA GCGTTTAAGT GATATGGCCG ACAACAAGGC GCACATCATG
ATCTCGACCA ATTCCATTAT TCTTTCTGTC ATCCTCAGCC TGTTGCTGCG CAAACTGGAA
GACAATCCAC ACCTCATTAT TCCTACACTG CTGCTGCTTA TCGTATGCGT GGTTACCATG
GTGTTCTCCA TCCTGGCTAC CAGGCCATCT ATTCCGGAAG GGATATTTAC ACCTGAGGAC
ATCAGGGAGA AAAGGGTAAA CCTGCTTTTC TTTGGTAATT TCTACCGCAT GAGCCTGCCC
GATTATCAGG AAGGGATGCT TAAAATGATG GAAGACCGCG ATTTTCTTTA TGGCAGTTTA
ATCAAGGATG TATATGCACA GGGCGTAGTA TTGGGGCGTA AATACCGCTT GCTAAGAATT
GCCTATAGTG TTTTCATGTT TGGTATTGTA GCCGCTGTAC TGGCATTTAT TGTGGCTTCT
GGCTGGGTAA CTATGTAA
 
Protein sequence
MPGSGSDKNI KEMQYREILD QLRTHVASLF HAHNDARFIY HNLHHTEQVV ENTVKIASHY 
QLSDQDFFIV TAASWFHDLG YLFDCRQHEA RGEIMAAEFL TGKGVNPEII AQVSGCILAT
RMPQNPVGLL QQIVCDADLF HLGSDSFKER NKLMRREASA FCNKEIDKTE WRVKTIALFK
AHHYHTDFCR QLLDAKKAQN LAEMEHKLTH PAPLETTAIV KKEKKKKSDR PERGVETMFR
ISSTNHQRLS DMADNKAHIM ISTNSIILSV ILSLLLRKLE DNPHLIIPTL LLLIVCVVTM
VFSILATRPS IPEGIFTPED IREKRVNLLF FGNFYRMSLP DYQEGMLKMM EDRDFLYGSL
IKDVYAQGVV LGRKYRLLRI AYSVFMFGIV AAVLAFIVAS GWVTM