Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2481 |
Symbol | |
ID | 8253588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2879311 |
End bp | 2880528 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936131 |
Product | hypothetical protein |
Protein accession | YP_003092747 |
Protein GI | 255532375 |
COG category | [S] Function unknown |
COG ID | [COG4339] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.280099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGGTT CAGGTTCTGA TAAAAACATA AAAGAGATGC AGTACCGGGA AATATTAGAT CAGCTTCGTA CCCATGTTGC AAGCCTGTTC CATGCGCACA ATGATGCGCG TTTTATTTAT CATAACCTGC ACCATACCGA GCAGGTAGTA GAAAATACGG TTAAAATTGC CAGCCATTAC CAGTTGTCAG ATCAGGATTT CTTTATAGTA ACGGCCGCCA GCTGGTTTCA CGATCTGGGC TATTTGTTCG ATTGCCGTCA GCATGAGGCC CGCGGAGAAA TCATGGCAGC CGAATTTTTA ACCGGTAAAG GGGTAAATCC TGAGATCATT GCTCAGGTCA GCGGCTGTAT CCTGGCCACA AGGATGCCCC AAAATCCGGT CGGACTGCTG CAACAGATCG TTTGTGATGC CGACCTCTTT CATCTGGGCA GCGACAGCTT TAAAGAACGG AATAAGCTGA TGCGCAGGGA AGCCAGTGCA TTTTGCAATA AAGAAATTGA TAAAACGGAG TGGAGGGTTA AAACCATAGC CCTGTTCAAA GCACATCATT ACCATACAGA TTTTTGCCGT CAGCTGCTCG ACGCCAAAAA AGCACAAAAC CTTGCCGAAA TGGAACATAA GCTCACTCAT CCAGCCCCAT TGGAAACTAC AGCAATTGTA AAAAAAGAAA AAAAGAAAAA GAGCGACAGG CCGGAGCGGG GTGTCGAAAC CATGTTCAGG ATCTCCTCCA CCAATCACCA GCGTTTAAGT GATATGGCCG ACAACAAGGC GCACATCATG ATCTCGACCA ATTCCATTAT TCTTTCTGTC ATCCTCAGCC TGTTGCTGCG CAAACTGGAA GACAATCCAC ACCTCATTAT TCCTACACTG CTGCTGCTTA TCGTATGCGT GGTTACCATG GTGTTCTCCA TCCTGGCTAC CAGGCCATCT ATTCCGGAAG GGATATTTAC ACCTGAGGAC ATCAGGGAGA AAAGGGTAAA CCTGCTTTTC TTTGGTAATT TCTACCGCAT GAGCCTGCCC GATTATCAGG AAGGGATGCT TAAAATGATG GAAGACCGCG ATTTTCTTTA TGGCAGTTTA ATCAAGGATG TATATGCACA GGGCGTAGTA TTGGGGCGTA AATACCGCTT GCTAAGAATT GCCTATAGTG TTTTCATGTT TGGTATTGTA GCCGCTGTAC TGGCATTTAT TGTGGCTTCT GGCTGGGTAA CTATGTAA
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Protein sequence | MPGSGSDKNI KEMQYREILD QLRTHVASLF HAHNDARFIY HNLHHTEQVV ENTVKIASHY QLSDQDFFIV TAASWFHDLG YLFDCRQHEA RGEIMAAEFL TGKGVNPEII AQVSGCILAT RMPQNPVGLL QQIVCDADLF HLGSDSFKER NKLMRREASA FCNKEIDKTE WRVKTIALFK AHHYHTDFCR QLLDAKKAQN LAEMEHKLTH PAPLETTAIV KKEKKKKSDR PERGVETMFR ISSTNHQRLS DMADNKAHIM ISTNSIILSV ILSLLLRKLE DNPHLIIPTL LLLIVCVVTM VFSILATRPS IPEGIFTPED IREKRVNLLF FGNFYRMSLP DYQEGMLKMM EDRDFLYGSL IKDVYAQGVV LGRKYRLLRI AYSVFMFGIV AAVLAFIVAS GWVTM
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