| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2477 |
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| Symbol | |
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| ID | 8253584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2871383 |
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| End bp | 2873995 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644936127 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_003092743 |
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| Protein GI | 255532371 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.932221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTTA AAAAGAGTCT GTTTGCAGTA TTGTTGTCTG GTCCGGTTTT AACTGCTGCA
TATTCTGTTG CAAAAGCACA GCAACTGCCA GCAAAAGACT CCATCACCGT TGCCGTTGCA
CCCGAGTACA ATAGTGTCAG TACCTTTCAC CGGTTCTGGC TGGGCGAAAG CTATCGTAAG
ATCTGGGCTA CACCTGTAAA ATTGAGGATC ATCGACCTGC AGAAAGAAAA AGGGGGGCTC
AAAATTGTAA AGCTTGGCGG GGGAATGCAG ACCCGCTCTT TAAGGCTTGT CGACCCCACT
GGTAAGGAAT GGGCCCTGCG TACCGTTCAG AAATATCCTG AGCAGGGCAT GGCCGAGAAC
CTTCGTGCCA CCATCGCCAA AGACATTGCC CAGGACCAGG TCTCTACCAA TCACCCTTTT
GCTGCACTGG TGGTGCCCAC ACTGGCCTCT GCACTTGGCA TCCCACATTC TAAACCGGAA
ATCGTATATG TAGGTGATGA TCCCGGCCTG GGCGAATACC GGGAGCGTTT CGCCAATGCC
GTTTATTTAA TAGAAGAAAG AAGTCCTTTT GAAAAGGAAA CAGACAATAC CGAAAAAGTT
CAGCGCAAGA TCCAGCAGAA CAATGATACC CGGGCCGAAC AACAGCTTAC GTTAAGGGCA
AGGATGCTCG ATTTTTTGCT GGGCGACTGG GACAGGCATG AAGACAACTG GCGCTGGCTG
GCAGAAAAGG ACAAAGATAA AGGGGAAACA ACCTATATCC CTGTGCCCCG CGACAGAGAC
AAGGTCTTTT ATAAAACTAC CGGGGTATTT CCCTGGGTGC TTACCCATCA GTGGCTCAAG
ACCCATTTGC AGCCTTACAG CGATAACATC AGGGATGTAG ACCACTGGAG CTTTAATGAA
CGGTATTTTG ACCGCTATTT TTTAAACGAA CTTACGGCGC AGGACTGGAA AAAAGAAGCA
GCCTACGTGC AGCAGAAGCT GAGCAATGAA GTGGTGCTGG AAGCCTTTAA ACAAATGCCC
GATACCATTT TTAAACTGAA CGGTGCCGAA CTGATGCGCC ATTTTATTTC CCGAAGGGAT
AAACTGGATT CGCTTACCCA GCATTATTAC CGCTTCCTGT CTATCCATGT AGATGTACCC
GCCTCTGAAA AAAAGGAGAT CATTAAAGTT AAAAACCTGG ACAACGGAGA TGTAGAGCTG
AGCATCAACA ACATCAATAA AGAAGGAAAA AAAGGCCGTC TGGTATACAA AAGGATTTTT
GATCAGCACA TCACCAAAGA AGTCAGGCTT TTTGGTATCG GCGGTGAAGA TACTTTTGTC
GTAGAAGGTG CAGGCAGTTC CCGCATCCGT GTCCGCCTGG TAGGCGGGCC AGCCGGCAAT
TCCTATCAGG TAGCTGCAGA TGTGAAAAAT AAGCCCTTTA TCTACGATCA GCCAGATACA
GCCAATCATT TTCCTGCAAG GTCACTGGCT AAATTCAGGT TGGCAAATGA CACGCTGGTA
AACCGTTTTG ACAAGAACAG CTTCTTGTAC GACCGTACCG GGGTGCTTTT TAACGGTGGA
TACAACATCG ACCAGGGCAT ACAGGTCGCG CTGGGCTATG TGATCGAAAA GCAAGGTTTC
AGAAAGGAAC CCTATGCCCG TAAACACGAA TTCTGGGTGA ACTATAACAG TGGCCGGCGC
TCTTTTATAC TCGATTATGT CTCAGATTTT AAAAAGGCCA TAGGCAACAA CGACCTTACG
GTACATGCCA ACCTGCTTGG ACCCAATAAC CTGAGCAACT TTTTCGGACT GGGCAACAAT
ACAGAGAACA TAGACCATGA TTTTGATACC GATAATGGCG GGCCCGACCG TGAAGACGGG
ATTTCCTATT ACCGCAACAG GTACAATTAC CTCAATGCCG ATCTGAAGCT GGGCAGGCAA
TTGGGCAAAC ACCTGAGGGC CGATGTGGGG GTATTGTTTT CCTATTACAT GAGTAGTGCT
GCCGATAATG AGGAAAGGTT TTTTAACGAT TTTAATATAG CCAATCCCGA AGCGGAAGTA
TTTGCCAATA AATTATATGG TGGTTTTTCA GGGGGACTGG TGTACGACAG CCGCGACAAC
ATTTCGGTGC CCAAAAAGGG GATTTTCTGG AAAACCAGTT TTCTTGCGCA GCACCGGCTG
GATGAAGGGA GCGGCAGTTA TGGGGCTGTT ACCGCTGAGT TCCGTTTTTA CCTTAACCCG
GGCAAATCCG GACTGGTTAT TGCCAACAGG ATCGGCGGGG GCACAACCAT AGGCAGCCCA
ACCTTTTTTC AGCGCATGCA GCTGGGTGGG GTAAACAGCC TGAGGGGCTT CAACAGCAAA
CGTTTTACAG GTAATTCCAT GTTTTACAAC AATCTGGACC TGAGGCTTAA GCTCTTCAAT
TTTACTTCTT ACCTGGTTCC GGGTACCGTA GGTATGGTCG GTTTTACCGA TGTGGGCAGG
GTATGGGAAA AAGGGGAACA TTCTAACCGC TGGCATCAGG GCTATGGTGC TGGCCTGTAT
GTAATGCCGG GCGAAGTGAT CCTCTTGCAG GGCACTGTCG GGCTTTCCAA AGAAGCCAGT
ATGCTCTACC TGTCGGTAGG TTTTAACTTC TGA
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| Protein sequence | MHFKKSLFAV LLSGPVLTAA YSVAKAQQLP AKDSITVAVA PEYNSVSTFH RFWLGESYRK
IWATPVKLRI IDLQKEKGGL KIVKLGGGMQ TRSLRLVDPT GKEWALRTVQ KYPEQGMAEN
LRATIAKDIA QDQVSTNHPF AALVVPTLAS ALGIPHSKPE IVYVGDDPGL GEYRERFANA
VYLIEERSPF EKETDNTEKV QRKIQQNNDT RAEQQLTLRA RMLDFLLGDW DRHEDNWRWL
AEKDKDKGET TYIPVPRDRD KVFYKTTGVF PWVLTHQWLK THLQPYSDNI RDVDHWSFNE
RYFDRYFLNE LTAQDWKKEA AYVQQKLSNE VVLEAFKQMP DTIFKLNGAE LMRHFISRRD
KLDSLTQHYY RFLSIHVDVP ASEKKEIIKV KNLDNGDVEL SINNINKEGK KGRLVYKRIF
DQHITKEVRL FGIGGEDTFV VEGAGSSRIR VRLVGGPAGN SYQVAADVKN KPFIYDQPDT
ANHFPARSLA KFRLANDTLV NRFDKNSFLY DRTGVLFNGG YNIDQGIQVA LGYVIEKQGF
RKEPYARKHE FWVNYNSGRR SFILDYVSDF KKAIGNNDLT VHANLLGPNN LSNFFGLGNN
TENIDHDFDT DNGGPDREDG ISYYRNRYNY LNADLKLGRQ LGKHLRADVG VLFSYYMSSA
ADNEERFFND FNIANPEAEV FANKLYGGFS GGLVYDSRDN ISVPKKGIFW KTSFLAQHRL
DEGSGSYGAV TAEFRFYLNP GKSGLVIANR IGGGTTIGSP TFFQRMQLGG VNSLRGFNSK
RFTGNSMFYN NLDLRLKLFN FTSYLVPGTV GMVGFTDVGR VWEKGEHSNR WHQGYGAGLY
VMPGEVILLQ GTVGLSKEAS MLYLSVGFNF
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