Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2464 |
Symbol | |
ID | 8253571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2858757 |
End bp | 2859920 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936114 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003092730 |
Protein GI | 255532358 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.163506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTCTA ACACAAAACA TCGTTTCTTT TTAAGTCTGT TTTTCTTTAT GTCGGGCTTA AGTTTTTCTA CCTGGGCTTC GCGGATCCCG ACCATTAAAA CTACTTTTGG TTTCAATGAG GCCGAGCTGG GCAGTATATT GCTGGCCCTG CCCATAGGTT CCCTGCTGGG CCTGCCCATT TCGGGCTGGC TGGTGTCCAA ATACAACAGC CGCGGACCTT TAACGCTGGG CTACGGACTC AACATGCTGG CGCTTACGCT TATTGGTTTT GCACACAATA CCTTAAGCCT GGTTTTGGCC GTAGTGGTAT TTGCCTTTAC CACCCGTATC TTTAATATTT CTGTAAACAC CCAGGCCTTA ACCCTGCAAA AGCGTTTCGA TAAAAAGATC ATGGGTTCTT TTCATGGTTA CTGGAGCATG GGTGGCATAG CAGGAATCCT GCTGTCTACA CTTTTGCTCA GTTTCAATGT ACCCATCCAG ATTCATTTTA CGGCTGTAGC CATTGTGATG CTGTCGCTTA GCCTATATGC TTACCAGTAT TTGCTGAAGG GAGACCGCTC CGAAACCGGT AACAAGCTCA TTTTGAGCAA GCCAGATCCC TATATTTTTT ACCTGGGCCT GGTGGTTTTC CTTTGTGCCA TCTGTGAAGG GGGGATGTTC GACTGGAGCG GTATCTATTT CCAGGAAATT ATAAAAGTAG AGATCTTTAC CTATGGTTAC CTGATCTTCA TGACCTTTAT GGCCACTTCC AGATTTTTAT CCGATTTCAT TGTGGCACGC TTTGGCATGC CAAAAACCTA TATCATGAGC GCAAGCTGTA TTGTTTCGGG CATTTGTCTG GCCATTATTT TTCCGTATTT CTGGACGGCT ATGGTCGGCT TTTCGCTGGT AGGTTTTGGT ACCGCGGCTG TAATCCCGAT GTCTTACGCC CTGGCCGGTG CTTCAAAAAA ATATTCGGCA GGTATGGCCA TATCCATCAT TGCCACCTAT TCCATTACGG GGATGTTGCT TGGCCCGCCT TTAATTGGCT ATCTGGCCCA TGCCTTCAAT TTAAGGGTGT CTTTTGTCAT TTTTGCCCTG TGCGGGATAT TGCTGATCCC CATTACACAG CTATTTTTTA AACACCAAAG GCTTTCAGAT CAAAGCGTTA AGCCATTGAG CTGA
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Protein sequence | MISNTKHRFF LSLFFFMSGL SFSTWASRIP TIKTTFGFNE AELGSILLAL PIGSLLGLPI SGWLVSKYNS RGPLTLGYGL NMLALTLIGF AHNTLSLVLA VVVFAFTTRI FNISVNTQAL TLQKRFDKKI MGSFHGYWSM GGIAGILLST LLLSFNVPIQ IHFTAVAIVM LSLSLYAYQY LLKGDRSETG NKLILSKPDP YIFYLGLVVF LCAICEGGMF DWSGIYFQEI IKVEIFTYGY LIFMTFMATS RFLSDFIVAR FGMPKTYIMS ASCIVSGICL AIIFPYFWTA MVGFSLVGFG TAAVIPMSYA LAGASKKYSA GMAISIIATY SITGMLLGPP LIGYLAHAFN LRVSFVIFAL CGILLIPITQ LFFKHQRLSD QSVKPLS
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