Gene Phep_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2460 
Symbol 
ID8253567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2855228 
End bp2856004 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content47% 
IMG OID644936110 
Producthypothetical protein 
Protein accessionYP_003092726 
Protein GI255532354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAG CATTAAAAAG CATACAGGAG CGCATCGAAC CCCTTAGACA GCAGATTATA 
AACCATAAGG TTTACAGTGT GATCAACAGC CTGGAAGACC TGAGGATCTT TATGGAATAT
CACGTATACG CGGTATGGGA CTTTATGTCG CTTTTAAAAG CTTTGCAGAT TAACCTGACC
TGTACCAGTG TGCCCTGGTT TCCGGTAGGT TCGGCAAATA CCCGCTACCT GATCAACGAG
ATTGTGGCGG GGGAAGAATC GGATGTGGAC AGTACAGGCC AGCGCAAAAG TCATTTTGAA
ATGTACCTGG ATGCCATGGC ACAATGCGGT GCAGATACCA GCGGCATTGA CACATTTATC
CATGCACTTC AAAAAACAGG AGACCTGCCC AATGCTTATC AGGCTGCCGG AACACCGGAA
CCTGCGCGTG AGTTTGTTGA TTTTACTTTT AAGATCATCC ACAGCAATGC GGCCCATTTA
CAGACCAGTA CCTTTACTTT TGGAAGGGAA GACCTGATCC CGAATATGTT CCTGACCATG
GTAAACGACC TGAATAAAAA ATTTCCTGAA CAACTGTCTT TATTTAAATA TTACCTGGAC
AGGCATATAG AAGTGGATGG CGACCACCAC AGTTACCTGG CCCTGGCCAT GACTGCCGAG
CTTTGTGCTG ATGATGTGGC CCTTTGGCAG GATGCGGAAC AGGCCAGTAT AGCGGCACTT
GAAAAACGCA TAGCACTTTG GGATGGTGCC TACAAGGCCA TTCTGGCCCA GATATAG
 
Protein sequence
MSAALKSIQE RIEPLRQQII NHKVYSVINS LEDLRIFMEY HVYAVWDFMS LLKALQINLT 
CTSVPWFPVG SANTRYLINE IVAGEESDVD STGQRKSHFE MYLDAMAQCG ADTSGIDTFI
HALQKTGDLP NAYQAAGTPE PAREFVDFTF KIIHSNAAHL QTSTFTFGRE DLIPNMFLTM
VNDLNKKFPE QLSLFKYYLD RHIEVDGDHH SYLALAMTAE LCADDVALWQ DAEQASIAAL
EKRIALWDGA YKAILAQI