| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2352 |
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| Symbol | |
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| ID | 8253458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2746399 |
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| End bp | 2749656 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936001 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092618 |
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| Protein GI | 255532246 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.456496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACT ATAGTGAATT TCTTGATTTC TATGGGAGAT CATTCTTAAA TGTGCTGTTA
TTTTTTATTT TGTTTTTTAG TACTGTTTGT TGCTCTTCTA CACTTGCACA AAAACTTAAG
GTTCCTATAC AACTTCCTGG AAAAGTGGTT GTGCCGGATG CACAGGCCAA CCAGGTTTAT
GTCAGATCAA AGAACTCTGG CGCATTGAGG ACCGACTCTG TCGGTAATTT CAAATATGAA
GTTAGGGCAT TCCCCGACAC TTTACGTTTT TCGAGATCTG ACCTATTTCC AGTAATCAGG
ATTCTACGCA GTGAAAGTGA TGTTTCTGAG CCCCTTGTTG TACGAATGAT ACAACAAGTT
AAGCAGCTGG ATCAAGTGGA GATTAGTACA GGATACCAGA AAGTAAAGCC TAATGAAACT
AATGGAACAG TTTCGGTTAT TGATTCTAGG ATGCTCAATG CTAGAACGGG GACCAACATA
CTTGATAGGC TTCTGGGGCA AAGTTCTGGT CTTCTTCTGA ACACAGGAAA ATCTAATGCA
AATCCGCAGA ACAAAACAGG AATTTCAATC AGGGGGCTCG GAACAATAAA CGGCCCGCTC
GATCCGCTAA TCGTTTTAGA TGGTTTTATC TATGAAGGAG ATATAAACAA TATCAATCCA
TTCGATATTG AAAGTGTATC GATTCTTAAA GATGCTTCAG CAACTTCAAT TTGGGGCGCT
AGGGCTGGAA ACGGTGTTAT TGTACTAAGT TCAAAAAAAG CGCGGCTAAA TCAGTCGCTG
AACATATCTT TTTCTGCCAA TGCCACCGTG CGAAGTATGG TTGATTTAAA AAGTTTAAAG
CAGGGGGCTA CTACTGATGT ATTGGATGTC GAACGATTCC TTTTTGATAA GGGATATTTT
GACGCTAGGA TATCTAACGG ATATGCTTCT CTTTCCCCTG CTGTTGAGTT GTTTTTAGCT
CAGCGGAACG GGAAGATAAG TGCTGCTCAA CTGGAGACCG GACTTGATGT ACTCAGATCT
ACAGATATAC AGCAGGATTG GCAAAAAGAG TTTTACACTA ATGCTCTTAC CCAACAATAC
GCGGTGAACC TTAGATTAGG TACGTCAAAA AATACTCAGT CTGTTACCGC TGGTTTCGAC
CGTGGCTACG ATGAGAGTTA TGCTGGATCA AAAAAGTATA ATTTGCGATA TGCACAAGAA
ACTTTACTTA CGCCTAGACT TTCCTTCTCC ACCTCGATAA GTTTGACGTT TGCAACTGGT
AGTTCGGGTC GCCCAACCTA TGGTTCACTA CTGATTGCCG GAAGACAAGG ATATGCTCCC
TTGAGAGATG CAGCTGGAAA TCCGCTTTCA TGGGCTCGTG AATTTAGGTC TGCTTATACA
GATACCGCGG GAGCTGGAAA GCTACAGGAC TGGAATTATT ATCCGACAGA AGAATACAAA
CATGCTATAA CATCTTTTGA CCGGCAGGAA ATTCTTGGAT CAGCTAGCAT GCGTTATAAA
GTGCTGGACT TTCTAAATGT AGAGGCCAGT TATCAGCGTC AGAAGCAAAA CTTATCTATA
CTCAATAACT CGGACGGGGA GAGTTTTGCA TCCAGAAACT TAGTCAATTC TTTCAGCCAG
TTCAATAGAA CGACAGGTGT GATGAAGTAT ATTGTTCCGA AAGGTGGAAG CCTAAGGACG
GATCGCCAGG AGGTCACATC TTCTACGGCT AGATTACAGG TAAACCTTGA TAAAAATATA
GGTGTGTCTT CGATCGGTTT TCTTGCAGGT GCGGAGGTTC GTGAAGCTCA GTCAATTGGT
AGCGGAGATA TTTTATATGG TTATTTGAAT GATCCGCTTG TATACCAAAT GGTGGATTTT
GCAGGTAGCT ATCCAAATTT TATTACAGGA AATGCTTTGG CTATACCGGG AGGCTCTGGT
CTATCGAGTA CACAGAATCG CTTCATTAGC TTCTATGGCA ATGGATCGTA TACGTACCGC
GGCAAGTATC GTATTTCTAG TAGTATAAGA AGGGACGGCT CAAATGTTTT CGGGGCAAAT
ACGAACGACA AATGGAAACC CCTTTGGTCA GTCGGTCTTG GCTGGTCTTT ATCTCAAGAG
TCTTTTTACA ACATAACCTG GCTTCCTCAA TTAAGGTTGT CGTTGACCTA TGGCAAAAGC
GGGAATGTTG ATCTTTCCAA AACAGCATAC GCCACTGGAA CAATGGGTTC AAATTCTGCA
TCAACACTTC CTTTTGTGCG GATTTCGAGA ATCAATAATC CAGACTTAAG ATGGGAACAA
CTTTCACAGG TAAATCTAAA GGTGGATTTC AGCCTTAAAA ATGATCGGTT GATGGGAAGT
ATCGCTCTAT ACCGCAAACA TGGCTCGGAT CTATATGGAT CCTATCTATA TGATTATACA
ACATGGGGAG CTTCTGCAGA ATTGACCAGA AATGTCGCAG ATATGGAAGG AAAGGGAGTG
GATGCTGAAC TACACAGCAG GAATATTTTG GGTAGTAGCT TTAAATGGTC AACCGATCTG
TATTTTAGTA TGAACAAGAG TAAGACAGTA AAATACTATT CGACGAATAA TAGCCTTTCA
GCGTTGTTAG GAGGTGGTAA TACTATTACT CCAGTAGTTG GCCTTCCTCT TTATTCAATT
TCGGGGTATA AATGGGGCGG ACTTGATGGC GCAGGCAATC CTAGAGGTTA TCTTAAGGGC
AATCTCAGTA CAGATTATTC GGCAATTGCT GCCGAGGGTC GTCTAAGTGC TGCAAATATA
GAATATATAG GGCCTGCAAG TCCTACATGT TTTGGGTCGC TAATCAATTC CTTTAGCTAC
CACAATTTCA CGCTTGCTTT TAATATTAGT TATAGACTTG GATATTTTGT TAAAAAGCGC
TCGTTCAGTT CTTCGGACAT CACCGGTTCT GGAGTGTTAC ATCCAGATTA TTATTTGAGG
TGGCAGCGCC CTGGCGATGA GGCTAACACG ACTGTTCCTT CTTTTTTATA CCCTTTGAAT
TCTTTGCGAG ATAATTTTTA TTCCAATGCC AGCGTAAATG TGATCCCTGC AGACAATATC
CGGATTGATT ATGTGAATAT TGGTTATCAT ATCAGTGCGG AAAAATGGCG AATACCGTTC
AGGACATTAG ATTTATTTTT TAATGCAGCT AATGTTGGGT TGTTATGGAA AGCTAACAAT
TTTGGACTTG ATCCTGACTA CATGGATCAA ATTCCCCAGA CTAAGGGATA TACTATAGGA
ATAAGGGGGA GTTTTTAA
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| Protein sequence | MKNYSEFLDF YGRSFLNVLL FFILFFSTVC CSSTLAQKLK VPIQLPGKVV VPDAQANQVY
VRSKNSGALR TDSVGNFKYE VRAFPDTLRF SRSDLFPVIR ILRSESDVSE PLVVRMIQQV
KQLDQVEIST GYQKVKPNET NGTVSVIDSR MLNARTGTNI LDRLLGQSSG LLLNTGKSNA
NPQNKTGISI RGLGTINGPL DPLIVLDGFI YEGDINNINP FDIESVSILK DASATSIWGA
RAGNGVIVLS SKKARLNQSL NISFSANATV RSMVDLKSLK QGATTDVLDV ERFLFDKGYF
DARISNGYAS LSPAVELFLA QRNGKISAAQ LETGLDVLRS TDIQQDWQKE FYTNALTQQY
AVNLRLGTSK NTQSVTAGFD RGYDESYAGS KKYNLRYAQE TLLTPRLSFS TSISLTFATG
SSGRPTYGSL LIAGRQGYAP LRDAAGNPLS WAREFRSAYT DTAGAGKLQD WNYYPTEEYK
HAITSFDRQE ILGSASMRYK VLDFLNVEAS YQRQKQNLSI LNNSDGESFA SRNLVNSFSQ
FNRTTGVMKY IVPKGGSLRT DRQEVTSSTA RLQVNLDKNI GVSSIGFLAG AEVREAQSIG
SGDILYGYLN DPLVYQMVDF AGSYPNFITG NALAIPGGSG LSSTQNRFIS FYGNGSYTYR
GKYRISSSIR RDGSNVFGAN TNDKWKPLWS VGLGWSLSQE SFYNITWLPQ LRLSLTYGKS
GNVDLSKTAY ATGTMGSNSA STLPFVRISR INNPDLRWEQ LSQVNLKVDF SLKNDRLMGS
IALYRKHGSD LYGSYLYDYT TWGASAELTR NVADMEGKGV DAELHSRNIL GSSFKWSTDL
YFSMNKSKTV KYYSTNNSLS ALLGGGNTIT PVVGLPLYSI SGYKWGGLDG AGNPRGYLKG
NLSTDYSAIA AEGRLSAANI EYIGPASPTC FGSLINSFSY HNFTLAFNIS YRLGYFVKKR
SFSSSDITGS GVLHPDYYLR WQRPGDEANT TVPSFLYPLN SLRDNFYSNA SVNVIPADNI
RIDYVNIGYH ISAEKWRIPF RTLDLFFNAA NVGLLWKANN FGLDPDYMDQ IPQTKGYTIG
IRGSF
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