| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2310 |
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| Symbol | |
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| ID | 8253416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2688836 |
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| End bp | 2689735 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644935959 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003092576 |
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| Protein GI | 255532204 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.120361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.040249 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGA CCTTTCAGCA CCAAGCTTCG CTTATAGACA TGAGCTTCAC GATAAAGGAG
TATTTACAAC CTCACTTTAC GTCTCCTTTT CATTTTCATG ACTCTTATGA ACTTATCTAT
ATCGCTAAAA GCTTTGGTAA GCTTTATTCT GCCAATAACA TTGTTCACTT TAATGAAGGT
GAAATTTACC TGCTTGGATC TGGCTTTGCG CATTGTTTTT ATAACGACAA AGAATTCATC
CGATCGGGCC AAACTGCTCA CGCGATCGTT GCTTTTTTTA AAGAGGATTT TTTGGGCAAG
GATTTCTTCA GCAAAGGAGA ACTCACTAAG ATTAAGGACA TGCTGGACAA ATCGGTTTAC
GGAATTAAAA TTTCAAACAG TCCGGACAAT GTAAAGTCTG CCTTTCACAA ATTGGTTAGC
AGTAAGGGAA TGGATAGCCT CTTGATCTTA TTAAACATGT TAAACAATTT GTCAAACCTG
AAAAAAGAAA GCTTTTATTT CATCAATTCA TCCACCATAA AACCATCTTT GAATTACAAT
GACTCAAGGA AACTCGAATC AGTGGTAAAC TATGTAGTCG AAAATTTTAA AAATAACCTA
GATAGTAAAA CAGCCGCTTC TCTAGCCTGC TTAAATGAGG CCGCCTTTTG TAGATATTTC
AAACGGAGAA CGGAAAAAAC ATTCTCGCAG TTTGTAAATT ATGTACGGGT ATCGCATGCG
ACCAGCTTAC TTTTTAAGGA GAATATAAGC ATAGCCAACA TCTGTTTCGA ATGCGGATTT
AACAATATTT CCTATTTTAA CAGGCAGTTT AAGGAAATTA TGGGCCAAAC GCCCTTGGAG
TACAGAAAAG CTTTTGCTTA CTCGGAACAG GAAAACACAG CAGTGGAAGC AGCACAATAA
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| Protein sequence | MKMTFQHQAS LIDMSFTIKE YLQPHFTSPF HFHDSYELIY IAKSFGKLYS ANNIVHFNEG
EIYLLGSGFA HCFYNDKEFI RSGQTAHAIV AFFKEDFLGK DFFSKGELTK IKDMLDKSVY
GIKISNSPDN VKSAFHKLVS SKGMDSLLIL LNMLNNLSNL KKESFYFINS STIKPSLNYN
DSRKLESVVN YVVENFKNNL DSKTAASLAC LNEAAFCRYF KRRTEKTFSQ FVNYVRVSHA
TSLLFKENIS IANICFECGF NNISYFNRQF KEIMGQTPLE YRKAFAYSEQ ENTAVEAAQ
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