Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2303 |
Symbol | |
ID | 8253409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2679376 |
End bp | 2681094 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644935952 |
Product | alpha-L-rhamnosidase |
Protein accession | YP_003092569 |
Protein GI | 255532197 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.158323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.125431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGTCC ATAAATTAAT TCCCCGTCTA TTGGTATTGT TTCTAACCGT ACAGCTTGCA AATGCACAGC AGAAAAGCCC TCTTACCCGT CAATACATCA CACCTGTAAG AATTGTGTGG AAAAACGGTG ATGTTAGAAA TAGTGAACAG CTCTTAAAGC CAGGTATTGG CCAAGGTGAT CTCGCCAATA GGAATATCGT TATTCTTAAT AACAAAAAGG CTGGTGAAAA AGCGAGTATA CTACTTGACT TCGGCAGAGA GCTACATGGT GGCTTAGAGA TCGTAACAGG GATGTGGGGC GGTGGAAATA AACCGCGCAA TATCCACATT CGCTATGGCG AATCTGTCAG TGAAGCAATG TCAAGCATAG GCGAAAAAGG CGCTACGAAC GATCATGCGA TCCGTGACTT TAGGGCACTT GTGCCATGGC TAGGAAAGAT TCAATTTGGG GAAAGCGGTT TTCGCTTCGT TCGCATCGAT CTTGAAGATG AGCATGCGGA ACTGCAATTG AAAGAAATTC GCGCAATTTA TACCTTCAGA GACATACCTT ATCTCGGTTC TTTTAAAAGC AGTGATGAAC GTTTGAATAA AATATGGCAA ACAGGGGCAT ACACAGTGCA TTTGAATATG CAAGAGTATC TATGGGACGG CATAAAAAGA GACCGACTGG TTTGGGTTGG AGATTTACAT CCTGAAGTAT CTACCTTAAG TGCTGTCTTT GGCTATAATG AAGTGGTGCC TAAAAGTTTA GATTTATCAA GAGACACTAC GCCCTTACCA GGATGGATGA ATGGGATTAG TACCTACTCC ATGTGGTGGA TCATCATCCA CTATGATTGG TATATGAAAA ATGGCAATTT GGCATATCTA AAAGAGCAGA AGACATATCT GAATGGATTA GTGAAACAAA TTGTGGCTAG GGTGGGGAAC GACAACAAAG AGCATATGGA CGGTACGCGC TTCCTTGACT GGCCCTCTAG CGAAAACCCC AAAGGCATAC ATGCAGGTCT ACAGGCAATG ACCGTATGGT CACTCGCTAC AGCTGCTAAA ATAAGCGTCT TAGTGGGAGA TAAGGAAACC GAGGCCCTCT GCAATCTTAC CGTTACACGA ATGAAGAAAT ACATTCCTGA TGTAAATAAC TCAAAACAAG CAGCCGCATT AATGGCTATT GCAGGCATCA CAACAGCCGA AAAAGCAAAC AAAGAAGTGC TCTCGGTAGG CGGGGCCAAA AATTTCTCTA CATTTTATGG TTATTACATG CTGGAGACAA AAGCAAAAGC AGGAGACTAT CAGGGTGCTA TAGACGTTAT CCGGGAATAT TGGGGCGCAA TGTTAGACCT TGGTGCTACT ACATTCTGGG AGGACTTTAA CATGGATTGG CTCCCCAATG CTTCCCGTAT TGACGAACCC GTGCCTGCCG GTAAAATAGA CATTCATGGC GATTACGGCG CCTACTGTTA CGTGGGTTTC CGGCATAGCC TTTGTCATGG ATGGGCTTCT GGACCCACCT CGTGGCTTAC GGAACATGTT TTAGGTATAA AGGTGATGGC TCCGGGCAGT AAAATCATTA AAATAACACC CCATCTGGGA GACCTTAAAT TTGCAGAGGG CACTTTTCCT ACACCCTACG GTGTGGTAAA AGTAAAGCAT ACCAAACTTG CCAATGGAAA AATTCATTCA GAAATCACCG GACCTAAACA AGTCAAAATA ATTCGCTGA
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Protein sequence | MIVHKLIPRL LVLFLTVQLA NAQQKSPLTR QYITPVRIVW KNGDVRNSEQ LLKPGIGQGD LANRNIVILN NKKAGEKASI LLDFGRELHG GLEIVTGMWG GGNKPRNIHI RYGESVSEAM SSIGEKGATN DHAIRDFRAL VPWLGKIQFG ESGFRFVRID LEDEHAELQL KEIRAIYTFR DIPYLGSFKS SDERLNKIWQ TGAYTVHLNM QEYLWDGIKR DRLVWVGDLH PEVSTLSAVF GYNEVVPKSL DLSRDTTPLP GWMNGISTYS MWWIIIHYDW YMKNGNLAYL KEQKTYLNGL VKQIVARVGN DNKEHMDGTR FLDWPSSENP KGIHAGLQAM TVWSLATAAK ISVLVGDKET EALCNLTVTR MKKYIPDVNN SKQAAALMAI AGITTAEKAN KEVLSVGGAK NFSTFYGYYM LETKAKAGDY QGAIDVIREY WGAMLDLGAT TFWEDFNMDW LPNASRIDEP VPAGKIDIHG DYGAYCYVGF RHSLCHGWAS GPTSWLTEHV LGIKVMAPGS KIIKITPHLG DLKFAEGTFP TPYGVVKVKH TKLANGKIHS EITGPKQVKI IR
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