| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2283 |
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| Symbol | |
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| ID | 8253389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2652340 |
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| End bp | 2655738 |
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| Gene Length | 3399 bp |
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| Protein Length | 1132 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935932 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092549 |
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| Protein GI | 255532177 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00214981 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGACGA TTGCAATACT GCAGGTAAGT GCTGCAACCT ATGGTCAGAA AATAACGCTT
TCTGAAAAGA ATGCGCAACT GGAAAAAGTA TTAAAAAAGA TCAGGGCCCA AAGTGGGTTT
AGTTTTCTTT ACGAAGATAC GGATCTGGCA AATTCCAAAG CTGTAAATGT CAACTTTTCG
AACGTGTCTA TCGATGATGC TTTAGAAAAG CTATTTATAA ACCAACAGCT ATCTTATTCA
ATTAAGGATA AAACTGTTGT GATTAAATCA AGCAAAACAC CCATAAACCA GTACGTTGCA
ACAATAGACA TCAGGGGAAA GGTATTGGAC GGTGATGGGA AACCTTTGCC TGGTGCCAAT
GTAAGGGTTA AAGGTGAAAC AAAAGGTACA ACGGCTAATG GCAACGGAGA GTTTGAGCTA
AAAGGTATAG ATTCAAAATC AATACTTGTG ATCTCCTATA TAGGCTTTCT GACTAAAGAG
GTTGCTGTTA ACAACCAGAA ACAATTAACC ATCGGCCTGG ATATAGATCA GTCTAAATTA
AATGAAGTCG TGGTAATTGG TTACGGTACA GCCAAAAGAA GTGACCTAAC CGGTTCTGTT
GGACAGGTTA ACATCAGTGA TTTTCAACAG GCACCAGTAA GGTCTTTTGA TGAGGCGCTG
GCTGGTCGCG TGGCAGGTGT ACAGGTAACC TCATCTGAAG GGCAGCCAGG ATCTGGTATC
GACATCATCA TCAGGGGAGC AAATTCTTTG ACGCAGGACA ATTCGCCTTT ATATGTAATA
GATGGTTTTC CTACCGAAAA TTTTGACAAC AATGCCATTA ACCCTGAAGA AATCGAATCC
ATTGATGTAC TAAAGGACGC TTCGGCAAGT GCTATTTATG GTGCAAGAGG AGCAAATGGT
GTAATTATCA TAACAACCAA AAGGGGTAAA GTGGGTTTGC CTGTTATTAA GTACAATGGT
TCTTATGGCA TTCAGAATAA CATTTATGAA GTACCATTGA TGAGCCCTTA TGAATATTTA
AAATTGCAGA GTGAAATTAC GGCTACTGAT TTTAAAAATG CGTATCTGGG ACCAATCGCA
GATCCTGTTA ACCCTACAAA CCCACCTATA GGGTATAAAT ATACACTGGA AGATTACCGT
AATGTAAAGG GAATAGACTG GCAAAGTCAG CTTTTCAGAA CGGCGCCAAT GCAGAGCCAT
TCTCTATCGA TGTCGGGCGG AACAGAGAAA ACGCGTTATT CCCTGTCAGG ACAAATATTT
ATGCAGGATG GGACAATTAT AAATTCCGGT TACCGACGCC AGCAAGCCAA GATGACCCTG
GACCAGACTG TAAATAATAA ATTTAAAGTA GGGGCAGACT TTACTTATAC AAGTTCTAAA
ACTTTTGGTT CGGCAACTTC AACTGCCGCC AATTCTTCAA TGAACAATTT TTTATATAGT
GTTTGGGGAT ACAGACCTGT AACGCCTATT GGTGTATTGC CTGAAGATGT AATAGAAGAA
CCTTCGGATG ATTTTGTAAA TACTTCTACA GATTATCGGT TTAACCCGAT CATGACTGCG
GAAAATCAAT TGAGACAAAC TTTTGCAAGA AATTTTGTAG GAAACGGATA TGCAGAGTAT
ACTTTTATAC CCGGACTTAA ACTGAGGATA AGCGGTGGAA TAAATAGGGT ACAAAGACGT
GCAGAGTCTT TTAACAACTC AAATACTTAT AGTGGAAGTC CCTCAAACCC TTTCACGAAC
GGACCAAATG GTAGCATCAC AAATTTTGAG ACCACTACCT GGTCAAATGA GAACATTTTA
ACTTACGACA AGAAGTTTGA CAAAAACCAT AAACTCAATG TAATTGGTGG ATTTACCTTA
AATGGTAATA AATATGGATA CTACGGTCTG TCTGCAAATG CCTTGCCTAA CGAAGCACTT
GGCTTAAGTG GCCTGGCCTC GGGAACTCCA CAACCTGTGA CTTCCTATAA CTCTGAATGG
GCGTTGGTTT CTGGTTTGGC AAGGGTAAAT TACAGTTATA AAAATAAGTA TCTCTTTACT
GCCTCGATGC GTGCAGACGG TTCATCTAAG TTTGGCCCGG GCAATCAATG GGGTTATTTT
CCTTCGGGAG CTATTGCCTG GAAATTGATC AATGAAGACT TCATGAAAAA TATTTCCTTT
CTTTCAGATG CCAAATTGAG ATTAAGCTGG GGTATTACAG GCAATAACAG GGTTGGAGAT
GGCGACCGCT TTGCCCAAAT GACTTATCCG ATTAATTCTT ATTATTCTTT CAATAACGGA
TTGGCCCAGG GCATAAACAT TACAAATGTG GGAAGTCCGA ACTTAAAATG GGAAAGTACA
AAACAAACAG ACATTGGGCT GGATGTAGGG TTCTTGAAAG ACAGAATAGG TTTTACTGCA
GAATACTATC GTAAAAACAC CACAGATTTA CTGTTAAATG CCTTATTGCC CTATACAAGC
GGGTATGTAA GTGCATTTAA AAATATTGGT GCCACCAGAA ATGAAGGTTT CGAGTTTTCA
ATTAATACCA CCAATATTAA AAATAAAAAT TTTTCCTGGA CCACCAGCTT CAATATTGCC
TTTAACAGAA ACAAGATTAT TGAACTTACT GAAAACCAGG AAAGCTTGAC AAGTAACATT
AGCTGGGATA GTTTTTATAG TGCTGTTCCA CTATATATTG CGAAACTTGG CCAACCCATA
GGGCAGATTT ACGGATACAT CTGGGATGGT GTTTATCAGC TTGATGATTT TACTCAGCCA
ACACCAACCA CCTATCTTTT GAAACCTGAA ATTGCTACAA ATGGTAATGC CAGAACCTCG
ATCAGGCCAG GAGATATCAA ATACAGGGAT ATTAACGGTG ATGGTGTAGT GAATGATTTT
GACCGGACTG TAATAGGTCG TGCTTATCCA ATACATCAGG GTGGTATGTC CAATAATTTC
AAATACAAGA ATTTTGACCT CGGTGTATTT TTACAGTGGT CTTATGGCAA TGATATTGTA
AATGCCAACA AACTTATATT TGAAGCTGGA AACAAAGCCT TCCTGAATCA ATATGCAACT
TATCAGGACC GCTGGACACC CGAAAATACA AATACCACCA TGCACCGTTC CGGTGGACAA
TATGGATACA ATTACTCAAC CAGAATTGTA GAAGATGGAT CATTCTTAAG GCTAAAGACG
GTATCCTTAG GTTATACTCT TCCTAAAACC CTAATAAACA CTGTTAAAAT AAAAGGCTTA
AGGGTTTACG CGTCTGCACA AAACCTATTT ACCTGGACTA ATTATTCTGG TTCAGATCCT
GAAGTAAATG TTAAACGAAC CGCATTAACG CCTGGATTTG ATTATTCAGC CTATCCACGT
GCGCGTACCA TTACTTTTGG CGCCGGTTTA TCCTTTTAA
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| Protein sequence | MLTIAILQVS AATYGQKITL SEKNAQLEKV LKKIRAQSGF SFLYEDTDLA NSKAVNVNFS
NVSIDDALEK LFINQQLSYS IKDKTVVIKS SKTPINQYVA TIDIRGKVLD GDGKPLPGAN
VRVKGETKGT TANGNGEFEL KGIDSKSILV ISYIGFLTKE VAVNNQKQLT IGLDIDQSKL
NEVVVIGYGT AKRSDLTGSV GQVNISDFQQ APVRSFDEAL AGRVAGVQVT SSEGQPGSGI
DIIIRGANSL TQDNSPLYVI DGFPTENFDN NAINPEEIES IDVLKDASAS AIYGARGANG
VIIITTKRGK VGLPVIKYNG SYGIQNNIYE VPLMSPYEYL KLQSEITATD FKNAYLGPIA
DPVNPTNPPI GYKYTLEDYR NVKGIDWQSQ LFRTAPMQSH SLSMSGGTEK TRYSLSGQIF
MQDGTIINSG YRRQQAKMTL DQTVNNKFKV GADFTYTSSK TFGSATSTAA NSSMNNFLYS
VWGYRPVTPI GVLPEDVIEE PSDDFVNTST DYRFNPIMTA ENQLRQTFAR NFVGNGYAEY
TFIPGLKLRI SGGINRVQRR AESFNNSNTY SGSPSNPFTN GPNGSITNFE TTTWSNENIL
TYDKKFDKNH KLNVIGGFTL NGNKYGYYGL SANALPNEAL GLSGLASGTP QPVTSYNSEW
ALVSGLARVN YSYKNKYLFT ASMRADGSSK FGPGNQWGYF PSGAIAWKLI NEDFMKNISF
LSDAKLRLSW GITGNNRVGD GDRFAQMTYP INSYYSFNNG LAQGINITNV GSPNLKWEST
KQTDIGLDVG FLKDRIGFTA EYYRKNTTDL LLNALLPYTS GYVSAFKNIG ATRNEGFEFS
INTTNIKNKN FSWTTSFNIA FNRNKIIELT ENQESLTSNI SWDSFYSAVP LYIAKLGQPI
GQIYGYIWDG VYQLDDFTQP TPTTYLLKPE IATNGNARTS IRPGDIKYRD INGDGVVNDF
DRTVIGRAYP IHQGGMSNNF KYKNFDLGVF LQWSYGNDIV NANKLIFEAG NKAFLNQYAT
YQDRWTPENT NTTMHRSGGQ YGYNYSTRIV EDGSFLRLKT VSLGYTLPKT LINTVKIKGL
RVYASAQNLF TWTNYSGSDP EVNVKRTALT PGFDYSAYPR ARTITFGAGL SF
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