| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2266 |
|---|
| Symbol | |
|---|
| ID | 8253372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2634465 |
|---|
| End bp | 2634794 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644935915 |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_003092532 |
|---|
| Protein GI | 255532160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0639842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACTT TAGGTGAAAA ATTTAGAATC TTACGCCAGA AAAAGGGAGT TAACCAAAAA
GCAATGGCTG ATCTGTTGGA AATATCTATC CCGGCGTATT CTAAGCTTGA AACAGGAATT
ACAGACCCTA ACTTCAGCAG AATAAATCAG ATAGCAGAAG TTCACAATTT AACCCTTAGA
GAGTTTTTAG ATATTGGAGA AGAAGGGGTA AGCGAGCAGG AACAAGTAGT CTCACAGTTA
AAGGAAAAAA TCAGTCAGCT GGAAAATTCG GTAATCAGGT TACAGAGTAA ACTGATCGAC
CTTTACGATC GGGATGACCA GAAAAAATAA
|
|---|
| Protein sequence | MKTLGEKFRI LRQKKGVNQK AMADLLEISI PAYSKLETGI TDPNFSRINQ IAEVHNLTLR
EFLDIGEEGV SEQEQVVSQL KEKISQLENS VIRLQSKLID LYDRDDQKK
|
|---|
| |