Gene Phep_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2254 
Symbol 
ID8253360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2619163 
End bp2620251 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content34% 
IMG OID644935903 
Producthistidine kinase internal region 
Protein accessionYP_003092520 
Protein GI255532148 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGG CTTTTACAAG ATGTTTTAAT TTTTTATACA AGCACCGCAT TCATTTTATT 
GCCTGGTTCT TCTTTATATT TTACGAAGTC ATCATAAGTG GAATACTCAG GGGGTATTTT
GCAACTGCTG GTAATTATGT TTTATTTTAT GTACTTAATA TCTGCCTTTT CTACTTTCAT
GCTTATGTGA TTATGCCTGC GGCGAAATCG CATACCAAAC ATGGGATATG GTTATTACCC
CTGCTAATTG TAATTGAGGT GGTCTTTTAT GTGCCTTTTT CAATATTATT GGCGGGATTT
TTAAATAAAT ATGCCGGACT AATGCTTGTA GCACCCGCAA CACTGACTAA AACTGCAGTA
GTCACTTCAG TTTGGAGAAC CATTTATTTT ATTCTTTTTT CTTCTGGTTA CTATTATCTG
GTCAATTATT TAAAAGAACG AAAAATTACA CAGGAAGCTG AGAAAGAGAA ATTAATTATG
ATCATTGAAA ATCAGAACGT GCAGGCTGAA CTGATCAAAT CCCAGTATGC ACGTTTAAAA
GCACAGATCA ATCCGCACTT TTTGTTCAAT ACCCTGAGCT TCATTTATGC AAGTGCACGT
AAAAAGGCGC CGGAAGCTGC TGAAGCCATA ATTACTTTAA CGGATATGAT GCGCTATTCT
ATCCAGGATG ATGATGAAAA GATCTTTACG GATATTGCAC TTGAAATTGA ACAAATAGAA
AACCTGATTA AACTTTATCA GATAAAATCG GAAACCAAAC TGAATGTTAT TTTAGAATAT
GATGCTGATT TGGCCAAAAT TCAGATTATT CCTTTGGTAC TGATTACACT TGTTGAAAAT
GTGTTTAAAC ATGGGGATCT TTTACAGGAA GCCCACCCGG CTTTAATTAG CATTAATCTT
GCGCACAATA TCCTGATTAT TGAAACCAGA AATTTAATTA ATTTAAATGG TTCTGTAATC
AGTCATAACA TCGGTTTGGA TAATATCAAA AAAAGAATAC AAATGGTTTA TGGTGACAAG
GCCTTTCTGC AGACGGATAG AGACAAAAGC AATTATTTCA ATGTTTTACT GAGTATTGAA
TTGAATTAA
 
Protein sequence
MKEAFTRCFN FLYKHRIHFI AWFFFIFYEV IISGILRGYF ATAGNYVLFY VLNICLFYFH 
AYVIMPAAKS HTKHGIWLLP LLIVIEVVFY VPFSILLAGF LNKYAGLMLV APATLTKTAV
VTSVWRTIYF ILFSSGYYYL VNYLKERKIT QEAEKEKLIM IIENQNVQAE LIKSQYARLK
AQINPHFLFN TLSFIYASAR KKAPEAAEAI ITLTDMMRYS IQDDDEKIFT DIALEIEQIE
NLIKLYQIKS ETKLNVILEY DADLAKIQII PLVLITLVEN VFKHGDLLQE AHPALISINL
AHNILIIETR NLINLNGSVI SHNIGLDNIK KRIQMVYGDK AFLQTDRDKS NYFNVLLSIE
LN