| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2249 |
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| Symbol | |
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| ID | 8253355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2611544 |
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| End bp | 2615116 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935898 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092515 |
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| Protein GI | 255532143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.520087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTTT ATAACCTATC CCGCCTTAGG CAGCTAGTCT ATGCTTTGGG ACAACCCTTG
CTTTCGGGCC TGGCTTTTTG CCAGATCAGT GAGGCCAGTA AAAGAAGAAT AATTATGCGA
GCTAAGCTTA CCATTCTGAT CATAACCGTT TGCTTTATGC ATGTTAGTGC TATAGGACAT
GCACAGCGGA TAACCTTGTC AAAGCAAGGG ACTTCTTTAA ACCAGGTATT TAAGGAAATC
AGGAAGCAGA CGGGCATGAA TATCATTTGG CCTCCGGAAA AGTTTAACGA GGATGCCAAA
ATAAACGTAA GCGTTAAAAA CATGTCACTT GATGAGGCCC TCTCACAAAT TCTGGCACCC
GTAAACTTAA CCTACGCCAT AAAAGACAAA ACCATTGTCA TACAGGTAAG GCAGGCTGCT
GGCCGTATCC TTGCCGATAC TTTAAAAATA GTAACCGGAA AAGTGGTCGA CCTGAAAGGG
ATTCCCTTAC CGGGCATCGG CATCAAACAT AAGGAAACCA ATACGGCAAC CACCACCAAT
GCAGAGGGTA TATACCAGAT CAAAGTACCC AATAAAGGAA CGCTGATATT TACGTATGTT
GGTTTTAAAA CCCAGGAAAT ACCGGTAGCA GGCAAAACCA CCATCAACAT TAAACTGCTT
GAAGAACAGA AAGAACTTTC TGAAGTTGTA GTGGTGGGTT ATGGCACCCA GAAAAAAGTA
AACCTTACCG GTGCAGTTGA TCAGGTTGGT AAAGAAGTTT TCGAAAACCG CCCCCTTACC
AGTACCACTA AAGGTTTACA GGGTGTTATC CCAAATTTAA ACATCAGAAT GACCGACGGA
AAACCTACCC GGACATCGTC CTATAACGTT CGTGGTACCA CTTCCATTGG TGCCGGTGGC
TCCGCACTGG TATTGATAGA TGGTGTCCCT GGCAATCCCG ACCTCGTCAA CCCCAATGAT
ATAGAGAGTG TTACTGTGTT AAAAGATGCA GCATCAGCAG CCATTTATGG CGCCAGAGGT
AGTTTTGGTG TAGTACTGAT CACCACCAAA GCCCCTGCAA AAGAAAAGGC TACCATTAAC
TATACTTCTG GTTATTCTCT TAATTATCAG ACCATCAGGC CCGATCTGGT TACCGAGGGC
TACCCATGGG CACAGGTATT TAACGATGCC TTCAGTTCAT GGAACGATTA TAGTGCCGAT
CCGCAAAAGG CCAACAGCGT GTTTCCATGG TCACAGGAAT ATCTTAAAGA ACTTAAAAAG
CGCTATGAAG CAGGCATAGG GCCCTCAACT GAAATTGACC CCGCCACCGG CAAATACATT
TATTATGGCA GTACCGACTG GCTAAAAGAA TTGTATGCCG ACAATACGCC CTCCATGGAG
CAGCAAATCA GTGTTTCGGG CAGCAGCGAT AAAACAGCTT TCTACATTTC CGGAAGGTAC
AACAACCAGG GTGGTATATT CCGTTACAAC CCCGATAAAT TTAACCAGTA TAACCTGCGC
GCAAAAGGAA GTATTCAGGC TACCAGCTGG CTGAAAATTG AAAATGACAT TACTTTTAAC
CAGCGCGATT ATTTCTTCCC GATCCTGAAC CATGCCAGCA ATACACCGGT TTGGCGACGC
ATCTCTGATG AAGCTTTTCC TGTTGCCATG TTAAGGAACC CCGATGGTAC ACTTACCGAT
AATGCCTCTA TCGTATTCGG CAGCTTCATT TCCGGTAACA ACTTCATGAA CGAAGCCAAC
AAACAAACCA GAAATACCTC CCGCGTCTTT ACTAATTTCC TCGACAATAA ACTAAAGATC
AACGGCGACT TTACCTTCGA TAAAACTTCT TTCAACAGGC GTTTTATCTA TAGCCCGGTA
CCTTACAGTA CGGCACCAAA TGTGTTTCTG GAGCGTGGTA TCAACAAAAT GAACAACCTT
GACCAGGATT TTACCTACCT GGCTTTAAAT ACTTATGGCG AATACAGCAA CAGCTTTGGG
AAACATAACT TTACCGCTTT ACTGGGTTAC AATTACGAAC AGTCTACACA AAAAGACCAG
TTTGTAGAAC GCGACAACCT CATTAATCCT GAATTTCCGG ATTTCTCTCT TGTAGACGGG
CAGAACTTCA TCCTTACCGG CGGGGGCAAC AAATGGATCA CCCTGGGCGG TTTCTTCCGT
GTCAACTACA ATTACGCAGG CAAGTATCTG TTTGAAGTGA ACGGCAGGTA CGACGGCTCA
TCCAAATTTC CTGAAGGCCA GCAATATGGC TTTTTTCCTT CTTTCTCTGG CGGATGGCGG
GTTTCTGAAG AGCCTTTCTG GAAATCTATC AAAAATACGG TCAATGAGTT TAAGCTACGT
GCCTCTTACG GAAGTCTGGG TAACGGAAAT ATAGATCCTT ACCAGTTCCT TCAAACTATG
GGGGTAACCA GGTCGCCAAT GGTACTGGGT GGCATCAGGC CAAACTATAC CCAGTTACCC
AATGTAATAC CTGATGGCCT GACCTGGGAA AAAGCCACTA CCACCAATTT AGGTGCCGAT
ATTTCCCTGT TCAGGAACAG GCTGACCACC AATTTCGACT GGTACATCAG AAGAACTACA
GATATGTTTA CCGTAGGCCT TCCTTTACCC GCTACTTTTG GTGCAGCAGT ACCCAAAGGG
AACTATGCCG ACTTAAAAAC CACCGGATGG GAGCTCTCTA TCGGCTGGCG TGATAAAATC
AATACCAGCA AGCCAATTGG CTATGATTTC AGGTTTACCC TGTCTGACAG CCAGTCGACC
ATCGACCGTT TCAACAACCC GCTCAACCTC ATTACCACTT ATTACCCGGG TATGAAAGTA
GGAGAGATCT GGGGTTTTGT AAATGACGGT TATTTTATAG ATCAGAACGA CATCAACACC
CATGCCAACC AAAGCTTAAT TAAGGTTTCG GCAGCGAATA AACCATTGCC GGGCGACATC
AAGTTCAAAG ATCTGAACGG AGACAACATC ATCAACCAGG GCACAAAAAC ATTAAGCGAT
CCTGGCGATC AGAAAGTGAT CGGCAACAGC AGTATCCGTT ATCAATATGG CTTCAACGCA
AATTTCGACT GGAACAACTT CTCTTTCGGT GTATTTTTTC AGGGCGTAGG AAAACGCGAT
TACATGCCTA CGGCCGACAA TTCCCTGTTC TGGGGCCCAT ACAACAGGCC ATATAGCTGG
CACCCAAAAG ATGTGGTAGA AAACATGTGG TCGCCGGAAA ACCCAAATGC CTACTACCCA
AGGTTACGCG GTTATACGGC ATTAAATGCG GGCGGAGAGC TCACTTACGC ACAAACCCAG
TACCTGCAAA ATGCAGCTTA TATCAGACTT AAAAATCTGT CTGTAGGCTA TAATCTCCCT
TCCGGCCTGA TCAAAAAAAT ACATTTGTCG GCCTTGCGTG TTTATTTAAC CGGACAAAAT
CTCTGGGTTT GGTCGCCCAT GTTTAAACAT ACCAAAAACA TGGATCCCGA AAACATAGAA
CAAGCCGATC CTGAACTGAA CAAAAATGCA GGACAAGGAA TGGCTTACCC TATGCTAAAA
ACCTATACCA TTGGTCTTAA TGTCACTTTA TAG
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| Protein sequence | MIFYNLSRLR QLVYALGQPL LSGLAFCQIS EASKRRIIMR AKLTILIITV CFMHVSAIGH
AQRITLSKQG TSLNQVFKEI RKQTGMNIIW PPEKFNEDAK INVSVKNMSL DEALSQILAP
VNLTYAIKDK TIVIQVRQAA GRILADTLKI VTGKVVDLKG IPLPGIGIKH KETNTATTTN
AEGIYQIKVP NKGTLIFTYV GFKTQEIPVA GKTTINIKLL EEQKELSEVV VVGYGTQKKV
NLTGAVDQVG KEVFENRPLT STTKGLQGVI PNLNIRMTDG KPTRTSSYNV RGTTSIGAGG
SALVLIDGVP GNPDLVNPND IESVTVLKDA ASAAIYGARG SFGVVLITTK APAKEKATIN
YTSGYSLNYQ TIRPDLVTEG YPWAQVFNDA FSSWNDYSAD PQKANSVFPW SQEYLKELKK
RYEAGIGPST EIDPATGKYI YYGSTDWLKE LYADNTPSME QQISVSGSSD KTAFYISGRY
NNQGGIFRYN PDKFNQYNLR AKGSIQATSW LKIENDITFN QRDYFFPILN HASNTPVWRR
ISDEAFPVAM LRNPDGTLTD NASIVFGSFI SGNNFMNEAN KQTRNTSRVF TNFLDNKLKI
NGDFTFDKTS FNRRFIYSPV PYSTAPNVFL ERGINKMNNL DQDFTYLALN TYGEYSNSFG
KHNFTALLGY NYEQSTQKDQ FVERDNLINP EFPDFSLVDG QNFILTGGGN KWITLGGFFR
VNYNYAGKYL FEVNGRYDGS SKFPEGQQYG FFPSFSGGWR VSEEPFWKSI KNTVNEFKLR
ASYGSLGNGN IDPYQFLQTM GVTRSPMVLG GIRPNYTQLP NVIPDGLTWE KATTTNLGAD
ISLFRNRLTT NFDWYIRRTT DMFTVGLPLP ATFGAAVPKG NYADLKTTGW ELSIGWRDKI
NTSKPIGYDF RFTLSDSQST IDRFNNPLNL ITTYYPGMKV GEIWGFVNDG YFIDQNDINT
HANQSLIKVS AANKPLPGDI KFKDLNGDNI INQGTKTLSD PGDQKVIGNS SIRYQYGFNA
NFDWNNFSFG VFFQGVGKRD YMPTADNSLF WGPYNRPYSW HPKDVVENMW SPENPNAYYP
RLRGYTALNA GGELTYAQTQ YLQNAAYIRL KNLSVGYNLP SGLIKKIHLS ALRVYLTGQN
LWVWSPMFKH TKNMDPENIE QADPELNKNA GQGMAYPMLK TYTIGLNVTL
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