| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2238 |
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| Symbol | |
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| ID | 8253344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2590649 |
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| End bp | 2591860 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935887 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003092504 |
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| Protein GI | 255532132 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0386337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.825384 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA ACCTGATTTT AAAAAGCCTG TTTGTACTGA CCACAGTTTC CTTTGCGATA
GGGGGATGTG GTGTCCGTAA AGCGAACCAA AACAGCAATG ACCTTGCGCA AATTGTTGAT
AAAGACATTA AAGCTGCAGA AGAACAGTAT AAATACTTTA TGAAGCAGAT CCCTGCAGAT
AAACTGCCAC GTAGCCTGGA TAAAAACGGG AAACTGGTGA CCAGCAATTC TGAATGGTGG
TGCAGCGGAT TTTATCCGGG TACGCTCTTG TACCTGTATG AACTGGGCAA AGACCCGGTA
CTGTATACCG AGGCGCTAAA CCGGTTAAAG CTTTTGGAAA AAGAACAGTT TAACAAAAGC
ACGCATGACC TGGGCTTTAT GATGTACTGC AGTTTTGGAA ATGCCAACCG TTTGAAACCA
TCAGCGGCCT ATAAGCAGAT CCTGATTAAC AGTGCCCGTT CCCTGGCCAG TCGTTTTAAC
CCCAAAGTGG GCTGTATCCG TTCCTGGAAC TCTAAAGACC CATCCGAATT TAAGGTGATC
ATTGACAATA TGATGAACCT GGAACTGTTG TTCTGGGCAG CTAAAGAAAC AGGTGACAAA
TCTTTTTACG ACATAGCAGT TACGCATGCC AATACTACGA TGAAAAATCA TTTCAGGCCC
GACTTCAGTT CCTATCACCT GGTGATATAC GACAGCAATA CCGGTGCCGT ACGTAAAAAA
CAAACGGTGC AGGGCTATGC AGATGATTCT GCCTGGGCAA GGGGACAGGG CTGGGGCCTA
TATGGTTATA CAGTGATGTA CCGGGAAACT AAAGACACCA GGTACCTGGA ACTGGCCAAA
AAGATAGCTG GCTTTATACT TGACAACCCT AAGCTGCCTG CAGATAAAAT TCCATACTGG
GATTTCAATG CACCGAATAT TCCGGATGCT TCGAGAGATG CCTCTGCCGG TTCGCTGATT
GCATCGGCTT TGCTGGAACT GGCCGGCTAT ACTGATAAAG CACTGGCTGA TCAATACGTT
TCGGCCGCTG AACTCATGAT CCGTTCACTG TCAAAACCTC CTTATCAGTC TTTATACGGA
GAAAACAGCG GTTTTCTGCT AACCAAAAGT GTAGGTCACC TGCCTGGGAA ATCTGAAGTG
GATGTGCCGC TTACCTATGC AGATTATTAT TATGCGGAGG CCTTACTGCG TTATAAAAAA
CTACAGAAAT AA
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| Protein sequence | MKRNLILKSL FVLTTVSFAI GGCGVRKANQ NSNDLAQIVD KDIKAAEEQY KYFMKQIPAD
KLPRSLDKNG KLVTSNSEWW CSGFYPGTLL YLYELGKDPV LYTEALNRLK LLEKEQFNKS
THDLGFMMYC SFGNANRLKP SAAYKQILIN SARSLASRFN PKVGCIRSWN SKDPSEFKVI
IDNMMNLELL FWAAKETGDK SFYDIAVTHA NTTMKNHFRP DFSSYHLVIY DSNTGAVRKK
QTVQGYADDS AWARGQGWGL YGYTVMYRET KDTRYLELAK KIAGFILDNP KLPADKIPYW
DFNAPNIPDA SRDASAGSLI ASALLELAGY TDKALADQYV SAAELMIRSL SKPPYQSLYG
ENSGFLLTKS VGHLPGKSEV DVPLTYADYY YAEALLRYKK LQK
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