| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2231 |
|---|
| Symbol | |
|---|
| ID | 8253337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2581909 |
|---|
| End bp | 2583063 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644935880 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_003092497 |
|---|
| Protein GI | 255532125 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACAA TAACCTCTTT AAAATATTAC CTGATAGTTG TTCTGACTAT ATGCACTACT
TTTTCTGGCC TTGCCCAGGT AAAAACTGCT GAAGCAGAAG CTGAATTAAA AAGCATCATG
AAAAAGCTGG AAGTTGTAGG ACTTTCTGTA GCAGTGGTAA AAAAAGGGGA ACTGATATAC
AGCAACTCCT TTGGGCTAAA AGATATAGAG AAAAATACAC TGCTTGAAAA CAGGGATATC
TTTAGGATCG CTTCGATCTC AAAATCATTT TCTGCAACTT CTATTCTACA GTTTGTGGAT
GCCGGAAAGG TATCATTAGA TGATGACTTT AGTAACCTTG TTGGTTTTAA AGTCAGAAAC
CCAAAATATC CGAATACGGT AATTACCCTG AAAATGGTCA TGTCCCATAC CTCGAGCATC
AACGACAGCG AAGGTTATTT TAACCTGGAT GCGATTAACC CGGAAAAAAA TGTGAACTGG
GCAAAATGTT ATAACAACTA TGAACCCGGA AAAGGATACA GATATTGTAA CCTGAACTAC
AACATGGTTG GGGCTGTAAT AGAAAAACTT TCTGGTGAGC GTTTCGATCA GTATGTGAAA
CACCATATTT TAGACCGCCT GGGTTTATAT GGCGGGTATT GTGTAGACTC GCTGGATGCC
AGCCGTTTTG CCACCTTGTA TGAATATGAT GCTGCAGCCC GGAAATTCAA TGCAGCACCT
TTGGCTTATG CCCCGAGGAG TGAGGACATC AGGAATTATA TAATGGGGTA CAGCACCCCC
ATATTTTCTC CGACAGGAGG AATGAAAATT TCGGCGACGG ACCTGGCAAA ATACATGACC
ATGCACATGA ACCTTGGAAA ATATAAAGGA GGCAGGATCA TCTCAAAAAA GAGTGCTAAA
ATTATGCAGA CCAAAGTATC TGATGAGGAA GGTTATGGTT TGGCCATATT GACTACAGCA
GATATGATAC CCGGCAAAGT TATGAAGGGG CATACAGGTT CTGCTTATGG CCTGTATAGT
GCTATGTTTT TTCAGCCTGA TGAAAAATTT GGAATTGTGG TGATCACCAA TGGCTGTAAT
CCTACCTATA CCAGGGGTTT TAACGATGTA TTAAGGGCAA CAGTGAGCAG CTTGTATAAC
AGTTTTATCA AATAA
|
|---|
| Protein sequence | MTTITSLKYY LIVVLTICTT FSGLAQVKTA EAEAELKSIM KKLEVVGLSV AVVKKGELIY
SNSFGLKDIE KNTLLENRDI FRIASISKSF SATSILQFVD AGKVSLDDDF SNLVGFKVRN
PKYPNTVITL KMVMSHTSSI NDSEGYFNLD AINPEKNVNW AKCYNNYEPG KGYRYCNLNY
NMVGAVIEKL SGERFDQYVK HHILDRLGLY GGYCVDSLDA SRFATLYEYD AAARKFNAAP
LAYAPRSEDI RNYIMGYSTP IFSPTGGMKI SATDLAKYMT MHMNLGKYKG GRIISKKSAK
IMQTKVSDEE GYGLAILTTA DMIPGKVMKG HTGSAYGLYS AMFFQPDEKF GIVVITNGCN
PTYTRGFNDV LRATVSSLYN SFIK
|
|---|
| |