| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2221 |
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| Symbol | |
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| ID | 8253327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2563073 |
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| End bp | 2566312 |
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| Gene Length | 3240 bp |
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| Protein Length | 1079 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935870 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092487 |
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| Protein GI | 255532115 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.169798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAA TATTACAAAA GATTTGCATT CTTATAGGTT TACTATACTT AAATATCGAT
GCTTTCGCGC AAACCGATAT CATTACCGGA GTGGTTTACG ATGAATCTAA AAATGTAACC
TTTCCGGGGG TAACCGTAAT GCTTGTTAAC CGCAATAACC TGGTATTAAC AGGTATAACG
ACAGATAACG ATGGTAAATT CCGGTTAAAA AAGACAGACA ATGCCGAAAA GATCATCTTC
TCTTATGTGG GCTATAAAAA ACAGGAATTT GTGATCGGTA CGCGAAAAAG TTTTGAGGTG
GTTCTGATCA ACGGCTACAA TACCATGGAT GAACTAAAGA TTGTTGGACA GAAGAACCCT
AAGGCCGATA TGGGCTTTCT TTCTATCGAT AAAAAAGAAC TCAGCAGTGC CGTCGCATCC
GTAAACCTGG AAGATCTGAA AAACCTTCCT GTAACATCTG TAGAACAGCT GATACAAGGT
GCTGCGCCAG GTCTGCAGGT TGTTGCCGCC AGTGGCGATC CGGGTGCCGC AGCTACCATA
AGGATCAGGG GTATTTCCAG TATCTCCGGC ATAAACGATC CGCTTTGGGT AGTGGATGGA
ACTGAGGTTA TCGGCAACGA CTATAAAGTA CAGAGTATAA CCGACTTCGG GTTTAGCCCC
ATAGGCGACA TAGACCCGTC CGACATTGAA TCTATTGATA TTTTAAAGGA CGCTTCTGCT
ACTGCACTTT ACGGATCCAA GGGTGCAAAC GGAGTAATCG TCATCAAAAC CAAAAGGGGT
AAACAGGGCA AGCCCGAATT CAGTTTTACC TCTAAATTTA CCTTTACAGA GGTACCCAGA
ACAATTCCAA TGATGTCTGG TGATGAACAC CGTATTTTCT CCATAGAAAG TTATGGCAAC
GGAACAGATG ATGGAAGTTT CCTCAAAGAG CTGCGTGGAG ACCTGACCAG GGCTGATGCC
TGGAAATACA ATAACAATAC CGACTGGATA GCTGCCATTA CCCGTAAGGG TTATTACCAG
CAATACAACA CTTCCTTAAG CGGTGGTGGA GAGCGGGTTA CCTATTACTG GGGAGTGGGT
TATACCAACC AGTATGGCAC TACCAAAGGT ACCGGATATG ACCGTTTTAA CAACCGCTTT
AACCTAAATT ATAAGGTTTC TGATAGGTTA AAAATTTCGG CCGATCTGTC CTTCATCAAT
TCCATAACTG ATAAAAGAGG GCAAACGCAT CCGATCAATG AAAAAGGACT TACAGATTTT
ACAGCCGATG AGATTTCCCC CATGGCTTAT GCCAGGGAGA TCAGTGCCTA TTATCCAATC
TATTCCAGGA ACGGACTGGA TTATTTTGTA GACCGCGCAG ACCCGGTTTC GGTCACTTCA
AGGTATAATC CTCTGGCCAT TATTGATTAT TCAACTTATC TGACCAAGTC GAACCGCTTT
ATGGCCTCTA CGGTAATAGA ATATAAAATT CTTAAAAACC TGGAGTTCCG GTCACAGATC
GGCGTCGATT TCCGCGAGTC TGCCGATGAA TATTTCCTTC CGGGATATGC TACTGCAGCC
ATTGCCGGAG AGGCACTTTT CAATGCAGGT ATGCAAACAG AAGGTCATCA GCTGATGATC
AACAACAGCA ACCGCCTGAC CTGGTCGGCC TTTAGTAAAA AGAACCACCG GCTTACAGTT
ACAGGAGTAT TGAACCTGAC CATGGACAAG GACAACTCTA CTTCCGTAAG CTACAGCAAC
GGCGCATCGC CGCAATTAAG GGCATCCGAT GCATCTGCGG TAGTTGCCTC AGCAGGTGGG
GCATTTGGTG AGCGGAGAAA CATAGGCACC TTTCTGCAGG GACATTATGT ATTTAAAGAC
AGATATTTCT TAACGGCCAC TGCAAAAATG GAAGGCGATT CCAGATATGG AAAAGACAAT
CTTTATACTG TTTATCCCGC AATTGGCGCA GGTTGGGAAA TGTCTAAAGA AAAATTTCTT
TCTGATGTAA AATGGATTAC AAATATCAAA CCGCGCTTTG CTTTTGGAAT TACAGGCAAC
CTGCCAAATG TGCTCAATTT ATATGATGTT GCCTATGCTA CCGGTACAGG TTACCTGGGC
CAGACCTATA CCTACCCTTC AAAATTTGCG TACGACAACA TTAAACAGGA AAGCACTACT
GAATACAATA CTGGGGTAGA CTGGAGCTTA TTCGACAATG CAGTATCCGG ACAAATTGAT
TATTATACCC GTACCACCAC CAATTTATTG CTGCAGGAAA CACTTTCCTC AACTTTAGGT
TATGCCAGTC AGTATATCAA TTTCGGTTCT GTACGCAACA GCGGGCTTGA GCTTGGCATT
TCGGCACTTA TTTTAAAGGG TGACAAAAAA TCACTACGCT GGAGAACGTT CTTCAATATC
TCCAGAAACC GGAATAAATT ATTGAGTCTG CCTGAAAAAT TTGATGCTGC TGCCTTTACC
CAGACCAAAG ATGGTTTCAC CTCCAAACTT CAGGCAGGTG ATGTGATCGG AGGGTTTTAT
GGTTACCGGG CTTTGGGCGT ATACCCAACA GATCAGGATG CCATATTGAA GGATAAAGAT
GGGGCCATCA TTTACGAAGC AGATGGCCTG ACGCCTAAAC GTATGCGCTT TGGATCGAAC
ACCGGACATC AGTTTAGCGG GGGAGAAATG CAATACGACG ACATTAACGG AGATGGGATC
ATCAATGAGC TCGACAGGGT ACAGATAGGT GATGCAAACC CGATGTTTTA CGGTGGCTGG
AACAATTCCT TTAACCTGGC CAACTGGTCC TTACAGGTAA ATTTCCAATA TCAGTATGGC
AACGATGTGA TCAACCTGAC CAGAAAATCT TTAGAAAAAA TGGCCGATTC GAAGAACCAG
GCAAAATCAG TAACCGACCG ATGGAGAAAA CAGGGCGATA TCAGCAATAT CCCGCGGGCA
GACAGACTGG CAGAATGGAA TTATGCAGCG TCAACACGAT GGGTAGAAGA TGCCTCCTAT
CTGCGTTTGA AAACCGTATC GCTCTCCTAC GATTTTGATA AGAAAACCGT AGGCAGGTTA
AAAATAGGCA TCAGAAGCAT GAGTGCCTTC TTAACTGCCT ATAACCTTTA TACCTGGACC
AGGTATTTGG GTATCGACCC GGAAGTACCT ATTACTGGCA GCGTAAATAT GTTTGGAATA
GACAACAATA CAACTGCACC TGCAAAGCAG TATACACTCG GGCTAAGGGT CTCACTTTAA
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| Protein sequence | MNRILQKICI LIGLLYLNID AFAQTDIITG VVYDESKNVT FPGVTVMLVN RNNLVLTGIT
TDNDGKFRLK KTDNAEKIIF SYVGYKKQEF VIGTRKSFEV VLINGYNTMD ELKIVGQKNP
KADMGFLSID KKELSSAVAS VNLEDLKNLP VTSVEQLIQG AAPGLQVVAA SGDPGAAATI
RIRGISSISG INDPLWVVDG TEVIGNDYKV QSITDFGFSP IGDIDPSDIE SIDILKDASA
TALYGSKGAN GVIVIKTKRG KQGKPEFSFT SKFTFTEVPR TIPMMSGDEH RIFSIESYGN
GTDDGSFLKE LRGDLTRADA WKYNNNTDWI AAITRKGYYQ QYNTSLSGGG ERVTYYWGVG
YTNQYGTTKG TGYDRFNNRF NLNYKVSDRL KISADLSFIN SITDKRGQTH PINEKGLTDF
TADEISPMAY AREISAYYPI YSRNGLDYFV DRADPVSVTS RYNPLAIIDY STYLTKSNRF
MASTVIEYKI LKNLEFRSQI GVDFRESADE YFLPGYATAA IAGEALFNAG MQTEGHQLMI
NNSNRLTWSA FSKKNHRLTV TGVLNLTMDK DNSTSVSYSN GASPQLRASD ASAVVASAGG
AFGERRNIGT FLQGHYVFKD RYFLTATAKM EGDSRYGKDN LYTVYPAIGA GWEMSKEKFL
SDVKWITNIK PRFAFGITGN LPNVLNLYDV AYATGTGYLG QTYTYPSKFA YDNIKQESTT
EYNTGVDWSL FDNAVSGQID YYTRTTTNLL LQETLSSTLG YASQYINFGS VRNSGLELGI
SALILKGDKK SLRWRTFFNI SRNRNKLLSL PEKFDAAAFT QTKDGFTSKL QAGDVIGGFY
GYRALGVYPT DQDAILKDKD GAIIYEADGL TPKRMRFGSN TGHQFSGGEM QYDDINGDGI
INELDRVQIG DANPMFYGGW NNSFNLANWS LQVNFQYQYG NDVINLTRKS LEKMADSKNQ
AKSVTDRWRK QGDISNIPRA DRLAEWNYAA STRWVEDASY LRLKTVSLSY DFDKKTVGRL
KIGIRSMSAF LTAYNLYTWT RYLGIDPEVP ITGSVNMFGI DNNTTAPAKQ YTLGLRVSL
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