Gene Phep_2217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2217 
Symbol 
ID8253323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2555720 
End bp2557279 
Gene Length1560 bp 
Protein Length519 aa 
Translation table11 
GC content45% 
IMG OID644935866 
Producthypothetical protein 
Protein accessionYP_003092483 
Protein GI255532111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGA AGACAATCAA AATAATAAAA TCAATAAGCA CAACTTCAGT AATGTTACTA 
CTAGGCATGT GTATCCTTTC CTGTAAAGAC TTTTTTAATG AAGCCCCAAC GGACACCATT
AAAGAAGAAA ACTTTTACAA GAACAGGGAA GATTTAAATG CCGCTGCAAT TGGTATGTAT
GAATCACTGG CACAGGAAAC GCACAAATTC CTGCTGTGGG GTGATGCCAG GGCCGACATG
GTTACTACCG GTCAGCCCGA ACCTGACCCT TACATCAATG AGTTTGTGGT AAATAATGTT
ACCTCAAATA ATCCTTATAC CAATTATGCA GGCATCTACC GCACCATTGC ACGCTGTAAC
CGTCAGATGG AAAAAGTGTA TAACGTGCAG AAACTGGATT CCAAAATTGA TGCCCGGGAT
GCGGGTGCAT TTTATGGCGA AGCATTGTTA CTGCGTGCCA TCTGTTATTA TGAGCTGGTA
CGTACTTATG AAAAATTTCC CATTATCCTT TCCGATTACG CGGAAACCAT AACCTACGTA
AATACAGAAG GGGAAACTGT AACCAAGCCA ACGCTCAGCC TGACTTCCGA ACAGATCAGC
GCCATTTACA GGATGCCTAA AGATCAGCAG GAAGTATGGA AACTGATTTA CAATGATGTA
CTTACCGCAT TAGGCATGTT GCCCGTAAAC TACAAATGGA ATGCGCAAAG CCTGAGTGCC
AAGGAAAGAT ATGGAAGGGT CTCACAACCT TTGGCTGCTA CGCTGGCGGC TGAAATAGCC
TTATGGCTGG GCGAATACCA GACCGCATCT TCTCTTTGCG ATCTGTCCAT CAAAAATTCA
AACCAAAGTC TGGGAACAGC AGGTACCTGG TTCAATCAGT TTTCAAGTGC CTATGCAACT
GGCCACTCCA TGTTCTTACT GGGCTATCAG TACGACAATA GCTTTGAAAC CAATAGGCTG
CAGGAGTTTA CTTCCCCGGT ACGTAAGGAT GGCGGAAAGT ATTACCTGAA ACCGGTTTCA
GCCCTCATGA ACCGCCTGTT TAAAGATGAT GTTTCTTTAA CCGATGCCGA CATCAGGGCC
CAGGCCAGCT TTAAAGTGCT TAATGGCGAT ACGGTAATCT GGAAATACAT CGGACTCGAC
AATGTATTGT CCATGCGTCT CGCTTATCAG AGCAGTGCCA GCTGGTCAGT TATGCGCAGT
GCGGATGCCT GGCTGCTCAA AGCTACAGCA GATCTGATGC TAAACAATTA CGCATCTGCC
TTTAATTTTA TCAATATGGT AAGAACGGCA AGGGGCCTGG TCATTTTGGA TAAGGCTACA
TTTAATTATA CCGACAAGGT GGTCATGGAT AAACTGATTT TTGACGAAAG GGCAAGGGAG
TTCGCTTTTG AGGGAAGGCG CTGGTACGAT TTAATGCTGC AGTCAAAACT CAACGGCAAA
AACATGCTGG CCGATGCGGT TACCGCAAAA TACCCTGCAA AAGACAAAGC CGCAATTAAG
ACCCGTCTGA TGGATGAGAA AAACTGGTAT ATCCCTGTCA ATCCAAAGTT ATGGGAGTAA
 
Protein sequence
MKMKTIKIIK SISTTSVMLL LGMCILSCKD FFNEAPTDTI KEENFYKNRE DLNAAAIGMY 
ESLAQETHKF LLWGDARADM VTTGQPEPDP YINEFVVNNV TSNNPYTNYA GIYRTIARCN
RQMEKVYNVQ KLDSKIDARD AGAFYGEALL LRAICYYELV RTYEKFPIIL SDYAETITYV
NTEGETVTKP TLSLTSEQIS AIYRMPKDQQ EVWKLIYNDV LTALGMLPVN YKWNAQSLSA
KERYGRVSQP LAATLAAEIA LWLGEYQTAS SLCDLSIKNS NQSLGTAGTW FNQFSSAYAT
GHSMFLLGYQ YDNSFETNRL QEFTSPVRKD GGKYYLKPVS ALMNRLFKDD VSLTDADIRA
QASFKVLNGD TVIWKYIGLD NVLSMRLAYQ SSASWSVMRS ADAWLLKATA DLMLNNYASA
FNFINMVRTA RGLVILDKAT FNYTDKVVMD KLIFDERARE FAFEGRRWYD LMLQSKLNGK
NMLADAVTAK YPAKDKAAIK TRLMDEKNWY IPVNPKLWE