| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2187 |
|---|
| Symbol | |
|---|
| ID | 8253293 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2511186 |
|---|
| End bp | 2511698 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644935836 |
|---|
| Product | glutathione peroxidase |
|---|
| Protein accession | YP_003092453 |
|---|
| Protein GI | 255532081 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.836515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAT TACTAATAAT ACTGAACCTC TTTTTTACGC CTCCGGCCAA AAGTGTATAC
GATTTTTCTT TTAAGACCAT TGATGGCAAG GAAGTAAAAC TTTCGAAATT TAAGGGTAAA
AAGATCCTTA TTGTAAACAC AGCTTCAAAA TGTGGGTATA CCCCGCAATA TGAGGACCTG
GAAAAGCTGC ACAAGCAATA CGGCAACAAA GTGGTGCTGA TCGGTTTCCC GGCAGGCAAT
TTTGGTGGAC AGGAACTGGC TACCAATAGC GAGATCAAGG AGTTTTGTAC CGGAAAGTAC
AATGTCGACT TTTTGCTGGC TGAAAAGAGC AGTGTAAAAG GAAATGACAT TACACCTTTG
TTTAAGTACC TTACAACAGC TGAAAACCCT GATTTTACAG GCGATATCAA CTGGAACTTT
GAAAAATTCC TGATCAATGA AAAGGGGCAG CTGGTACACC GTTTCCGTTC TAAAGTGAAA
CCACTGGATG AAAATATTAC CAAAAACCTG TAA
|
|---|
| Protein sequence | MNLLLIILNL FFTPPAKSVY DFSFKTIDGK EVKLSKFKGK KILIVNTASK CGYTPQYEDL
EKLHKQYGNK VVLIGFPAGN FGGQELATNS EIKEFCTGKY NVDFLLAEKS SVKGNDITPL
FKYLTTAENP DFTGDINWNF EKFLINEKGQ LVHRFRSKVK PLDENITKNL
|
|---|
| |