| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2174 |
|---|
| Symbol | |
|---|
| ID | 8253280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2499488 |
|---|
| End bp | 2499910 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644935823 |
|---|
| Product | 3-dehydroquinate dehydratase, type II |
|---|
| Protein accession | YP_003092440 |
|---|
| Protein GI | 255532068 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGA TACAAATTAT TAATGGCCCA AACTTAAACC TTTTAGGGCG TAGGGAACCT
GGTATTTATG GGAACCAGGG TTTTGAAGAA TACCTGGCTG AACTGCGCAA TATATACAGC
ATTATTGAAA TAGACTATTT TCAGAGCAAT GTAGAGGGGG AACTGATCAA TAAACTGCAT
GAGGTGGGTT TTAGCTATGA TGGTATTGTG ATTAACGGGG GTGCTTATAC CCATACTTCT
GTTGCCATTG CTGATGCCAT TGCAGCCATT AAAACACCTG TGGTAGAGGT ACATATCTCT
AACATTTATG CCAGGGAAGA ATTCAGGCAT GTATCGCTGA CCGGCAAAAA CTGTAAGGGC
GTATTGACAG GCTTTGGCAT GGACGGCTAC AGGCTGGCTA TTGAAAGCCT GCTGAAACCC
TAA
|
|---|
| Protein sequence | MMKIQIINGP NLNLLGRREP GIYGNQGFEE YLAELRNIYS IIEIDYFQSN VEGELINKLH
EVGFSYDGIV INGGAYTHTS VAIADAIAAI KTPVVEVHIS NIYAREEFRH VSLTGKNCKG
VLTGFGMDGY RLAIESLLKP
|
|---|
| |