| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2156 |
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| Symbol | |
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| ID | 8253262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2479781 |
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| End bp | 2481136 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935805 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_003092422 |
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| Protein GI | 255532050 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.540946 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGACGA GCCTTTATAC AAAATACAAA CCTTATTATT CCGACAATTT ACGTTTGGCA
ATGCCAATAG TAGTATCCCA GCTGGGACAT ACGCTGGTGC ATCTGGCAGA CAGTGTTATT
GTTGGACATT TTGCCGGAAC CATTCAGCTT GCAGCAGTAT CTTTGGTAAA TAGTCTGTTC
ATGCTGATAC TGGTTTTGGG CATGGGCATT TCTTACGGAC TGACACCTTT AATTGCACAG
GAGAATGGCC GCAAAAATTA CGACGAATGT GGAAAACTAT TATCCAATAG TCTGATCATC
AACTTTTTCA CCTCTATCCT GCTCTATGCT TTTGTACACC TGGGCACTTT AGTAGTGATA
GACCACATTG GCCAGTCGCC CGAAGTAGTA GCTTATGCCA AACCTTACCT GGGTTACCTG
GGCTTTTCTA TCATCCCCCT TATGATCTTT CAGACCTTTA AACAGTTTGC TGAAGGGCTG
GGCTTTACCA AACAGGCGAT GTTTGTTTCT ATCTGGGGTA ACCTGCTCAA TGTTATACTT
GGGATAATTT TTGTAAAGGG TATGTTCGGT ATTGAGGCTA TGGGTGTTAA AGGTGTAGGG
CTCAGCACCT TAATTGACCG TACTTTAATG GCCATTGTGA TGTCGTTCTA TGTACTCAGG
TCCAAACATT TTAAATTATA TACCAGGAGT TTCAGGCTTA GTTTTATAGA TAAAGTAAGG
AGCTTAAAAA TTGTCAAAAT TGGTGCACCT GTGGCCTTAC AATATTCCTT TGAGATCAGT
GCATTTAGTG GCGCAGCTAT CCTGATTGGA ACAATCGGGG CAATAGAACA GGCTGCACAT
CAGGTAGCGA TAAACCTTGC TGCTGTAACT TATATGATGG CCAGCGGTAT CGCTTCTGCG
GCTACAATTA AAACGGGTAA CAATTTTGGT AAACGAAATT TCGACGATCT TAGAAAATCG
GCCATTGCCA GCTATCATGT TATAATTTTG TTTATGAGTA TAACTGCTAT CCTGTTTATT
GCAGCCAGCA ATTTTCTTCC ATACATCTAT ACTGAAGATA TGGCGGTCAT AAAAATTGCT
GCGCAGTTGC TGATCATTGC CGGATTTTTT CAATTGTTTG ACGGTACCCA GGTGCTTGGC
CTTGGTGTAC TGAGAGGCAT TGGTGATGTA AACATTCCCA CGCTGATTAC TTTTATTGCT
TATTGGGTTA TCGGTATCCC CCTTGGATAT TTACTTGGAA TTGTACTTGG GCTTGGCGTT
AACGGTATCT GGTACGGACT AACCTTCGGA CTCCTCAGTG CCTCTGCCCT GCTGTTCATC
AGGTTTCAAA AAAAGACTAA AATTTTAGCG CTTTAA
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| Protein sequence | MLTSLYTKYK PYYSDNLRLA MPIVVSQLGH TLVHLADSVI VGHFAGTIQL AAVSLVNSLF
MLILVLGMGI SYGLTPLIAQ ENGRKNYDEC GKLLSNSLII NFFTSILLYA FVHLGTLVVI
DHIGQSPEVV AYAKPYLGYL GFSIIPLMIF QTFKQFAEGL GFTKQAMFVS IWGNLLNVIL
GIIFVKGMFG IEAMGVKGVG LSTLIDRTLM AIVMSFYVLR SKHFKLYTRS FRLSFIDKVR
SLKIVKIGAP VALQYSFEIS AFSGAAILIG TIGAIEQAAH QVAINLAAVT YMMASGIASA
ATIKTGNNFG KRNFDDLRKS AIASYHVIIL FMSITAILFI AASNFLPYIY TEDMAVIKIA
AQLLIIAGFF QLFDGTQVLG LGVLRGIGDV NIPTLITFIA YWVIGIPLGY LLGIVLGLGV
NGIWYGLTFG LLSASALLFI RFQKKTKILA L
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