Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2126 |
Symbol | |
ID | 8253232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2448343 |
End bp | 2448732 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644935775 |
Product | helix-turn-helix HxlR type |
Protein accession | YP_003092392 |
Protein GI | 255532020 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.653298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.626696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAAAG ACAACTCTAC GAATGCTTTT AATGAAAAAC AGATCAACGA CAGTTGTGGC ATGGCCTATT CTTTGTCTAT AATAGGTGGC AGATGGAAAC CGGCCATTTT GTGCAGGCTG TTGTATGGAA AAATGCGTTA CAGCGATTTA AAAAAATCCA TTGCCAATAT TTCTGAACGG ATGCTGGTTG CGCAGCTGCG CGAACTGGAA AGCGAACAGG TTGTACGAAG GATAGTCCAT CCGGTTGTCC CGCCAAGGGT AGAATATGAA TTGACAGAAC TGGGTTTAAC CATGAAGCAG ATGCTAAAGG CCATGTCAGA ATGGGGCAAT ATGCACCGAA ACAAAGTGCA GGGTACCGAA AGCCAGATCC CGGTGGATAC CTGTATCTAA
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Protein sequence | MRKDNSTNAF NEKQINDSCG MAYSLSIIGG RWKPAILCRL LYGKMRYSDL KKSIANISER MLVAQLRELE SEQVVRRIVH PVVPPRVEYE LTELGLTMKQ MLKAMSEWGN MHRNKVQGTE SQIPVDTCI
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