Gene Phep_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2126 
Symbol 
ID8253232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2448343 
End bp2448732 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content45% 
IMG OID644935775 
Producthelix-turn-helix HxlR type 
Protein accessionYP_003092392 
Protein GI255532020 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.653298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.626696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAG ACAACTCTAC GAATGCTTTT AATGAAAAAC AGATCAACGA CAGTTGTGGC 
ATGGCCTATT CTTTGTCTAT AATAGGTGGC AGATGGAAAC CGGCCATTTT GTGCAGGCTG
TTGTATGGAA AAATGCGTTA CAGCGATTTA AAAAAATCCA TTGCCAATAT TTCTGAACGG
ATGCTGGTTG CGCAGCTGCG CGAACTGGAA AGCGAACAGG TTGTACGAAG GATAGTCCAT
CCGGTTGTCC CGCCAAGGGT AGAATATGAA TTGACAGAAC TGGGTTTAAC CATGAAGCAG
ATGCTAAAGG CCATGTCAGA ATGGGGCAAT ATGCACCGAA ACAAAGTGCA GGGTACCGAA
AGCCAGATCC CGGTGGATAC CTGTATCTAA
 
Protein sequence
MRKDNSTNAF NEKQINDSCG MAYSLSIIGG RWKPAILCRL LYGKMRYSDL KKSIANISER 
MLVAQLRELE SEQVVRRIVH PVVPPRVEYE LTELGLTMKQ MLKAMSEWGN MHRNKVQGTE
SQIPVDTCI