Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2120 |
Symbol | |
ID | 8253226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2443995 |
End bp | 2444849 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644935769 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003092386 |
Protein GI | 255532014 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.466438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGA CAATCGTATA TGCTGTTGTA GCACTGCTGA TAGTATCATC CTGCAATAAT GTAAAACAAT CTAAAGAAAG TAAGGGATAT GCTGAAGTCA ACGGAATTAA AATGTACTAT GAAATTTATG GACAAGGTGA GCCACTTGTT TTGCTGCACG GTGGTGGCTC TACGATCCAA TCAACATTTG GAAGAGTCAT CCCAATGCTT GCAAAACATA GAAAACTAAT AGCCGTAGAG TTACAGGCGC ACGGAAGAAC TGGTGACAGG CCAGTGGACG CATCTTTTGA GCAGGACGCA GATGATGTAG CGACACTTTT GAAACACTTA AATATTGACA GAGCTGATTT CTTCGGCTTT AGTAACGGCG GGACAACCTG TGTTCAAATT GCCATTCGTT ACCCTCAAAT CGTTAGCAAA ATAATTTTAG GTTCTGCACT TTGCAAACGT AGTGGAATGC CTGCACAATT TTGGGATTTC ATGAAACAGG CAAAGCTATC TAATATGCCT GCAGAGTTAA AAGAAGCTTA CTTACAAGTT TCTCCAAATC CTGCTGGCCT ACAGGTAATG CATGATAAGG ATGCAAAAAG AATGGTTAAT TTTAGGGATA TACCCGACGA ACAGGTCAAA TCAATCAAAG CTCCTACCTT TATCATCATC GCAGACCAAG ATGTTATACA ACCCGAGCAT GCTATCGAAA TGCACAGACA GATTACCAAC TCAGAACTTG CTATAATCCC AGGCGTACAT GGTGAGTATA TTGAAGAAAT AACAACACTA AAGTCCAATT CTAAAGAAGC ACGCTTTGTA ATTCCAATGC TTGAAAGTTT CCTTGACAAA GGAAGAAGAA AGTAA
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Protein sequence | MKRTIVYAVV ALLIVSSCNN VKQSKESKGY AEVNGIKMYY EIYGQGEPLV LLHGGGSTIQ STFGRVIPML AKHRKLIAVE LQAHGRTGDR PVDASFEQDA DDVATLLKHL NIDRADFFGF SNGGTTCVQI AIRYPQIVSK IILGSALCKR SGMPAQFWDF MKQAKLSNMP AELKEAYLQV SPNPAGLQVM HDKDAKRMVN FRDIPDEQVK SIKAPTFIII ADQDVIQPEH AIEMHRQITN SELAIIPGVH GEYIEEITTL KSNSKEARFV IPMLESFLDK GRRK
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