Gene Phep_2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2120 
Symbol 
ID8253226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2443995 
End bp2444849 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content40% 
IMG OID644935769 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003092386 
Protein GI255532014 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.466438 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGA CAATCGTATA TGCTGTTGTA GCACTGCTGA TAGTATCATC CTGCAATAAT 
GTAAAACAAT CTAAAGAAAG TAAGGGATAT GCTGAAGTCA ACGGAATTAA AATGTACTAT
GAAATTTATG GACAAGGTGA GCCACTTGTT TTGCTGCACG GTGGTGGCTC TACGATCCAA
TCAACATTTG GAAGAGTCAT CCCAATGCTT GCAAAACATA GAAAACTAAT AGCCGTAGAG
TTACAGGCGC ACGGAAGAAC TGGTGACAGG CCAGTGGACG CATCTTTTGA GCAGGACGCA
GATGATGTAG CGACACTTTT GAAACACTTA AATATTGACA GAGCTGATTT CTTCGGCTTT
AGTAACGGCG GGACAACCTG TGTTCAAATT GCCATTCGTT ACCCTCAAAT CGTTAGCAAA
ATAATTTTAG GTTCTGCACT TTGCAAACGT AGTGGAATGC CTGCACAATT TTGGGATTTC
ATGAAACAGG CAAAGCTATC TAATATGCCT GCAGAGTTAA AAGAAGCTTA CTTACAAGTT
TCTCCAAATC CTGCTGGCCT ACAGGTAATG CATGATAAGG ATGCAAAAAG AATGGTTAAT
TTTAGGGATA TACCCGACGA ACAGGTCAAA TCAATCAAAG CTCCTACCTT TATCATCATC
GCAGACCAAG ATGTTATACA ACCCGAGCAT GCTATCGAAA TGCACAGACA GATTACCAAC
TCAGAACTTG CTATAATCCC AGGCGTACAT GGTGAGTATA TTGAAGAAAT AACAACACTA
AAGTCCAATT CTAAAGAAGC ACGCTTTGTA ATTCCAATGC TTGAAAGTTT CCTTGACAAA
GGAAGAAGAA AGTAA
 
Protein sequence
MKRTIVYAVV ALLIVSSCNN VKQSKESKGY AEVNGIKMYY EIYGQGEPLV LLHGGGSTIQ 
STFGRVIPML AKHRKLIAVE LQAHGRTGDR PVDASFEQDA DDVATLLKHL NIDRADFFGF
SNGGTTCVQI AIRYPQIVSK IILGSALCKR SGMPAQFWDF MKQAKLSNMP AELKEAYLQV
SPNPAGLQVM HDKDAKRMVN FRDIPDEQVK SIKAPTFIII ADQDVIQPEH AIEMHRQITN
SELAIIPGVH GEYIEEITTL KSNSKEARFV IPMLESFLDK GRRK