Gene Phep_2119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2119 
Symbol 
ID8253225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2443623 
End bp2443985 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content40% 
IMG OID644935768 
Productresponse regulator receiver 
Protein accessionYP_003092385 
Protein GI255532013 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.567157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAG AGGTTTTTAT TTTGGAAGAC GATAAAGATA TCGGCTTTAT TTTAAATCAT 
GTTTTATTTG AGCATGGGTA TCAGGTAAGT GTTTATGAGA ATTTATCGGA TATCAGGCAG
GGACTTGATG ACCACTTGCC AGACTTACTG CTGATGGATG TACGGTTGCC TGACGGAAAT
GGTCTGGATC TTTGTGCTGA ACTGAAATCT GCTGAAGGGG ATAGCCTACC GATTTTGATG
ATGTCGGCAG ATTTGGATGT GCACCTTAAT AGTATCTGTG TAGCTGATGA GTTTATCGCT
AAGCCTTTCG ATCTGAATGT GATATTAGGT AAGATTGAAT TTCACCTTCG TAAAGCAGGA
TAA
 
Protein sequence
MGKEVFILED DKDIGFILNH VLFEHGYQVS VYENLSDIRQ GLDDHLPDLL LMDVRLPDGN 
GLDLCAELKS AEGDSLPILM MSADLDVHLN SICVADEFIA KPFDLNVILG KIEFHLRKAG