Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2119 |
Symbol | |
ID | 8253225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 2443623 |
End bp | 2443985 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644935768 |
Product | response regulator receiver |
Protein accession | YP_003092385 |
Protein GI | 255532013 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.567157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAG AGGTTTTTAT TTTGGAAGAC GATAAAGATA TCGGCTTTAT TTTAAATCAT GTTTTATTTG AGCATGGGTA TCAGGTAAGT GTTTATGAGA ATTTATCGGA TATCAGGCAG GGACTTGATG ACCACTTGCC AGACTTACTG CTGATGGATG TACGGTTGCC TGACGGAAAT GGTCTGGATC TTTGTGCTGA ACTGAAATCT GCTGAAGGGG ATAGCCTACC GATTTTGATG ATGTCGGCAG ATTTGGATGT GCACCTTAAT AGTATCTGTG TAGCTGATGA GTTTATCGCT AAGCCTTTCG ATCTGAATGT GATATTAGGT AAGATTGAAT TTCACCTTCG TAAAGCAGGA TAA
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Protein sequence | MGKEVFILED DKDIGFILNH VLFEHGYQVS VYENLSDIRQ GLDDHLPDLL LMDVRLPDGN GLDLCAELKS AEGDSLPILM MSADLDVHLN SICVADEFIA KPFDLNVILG KIEFHLRKAG
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